RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ADRA1BP35368 520 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 THBS4P35443 961 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 IGHMBP2P38935 993 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 RBM5P52756 815 aaKnown RBP eCLIP4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 EEFSECP57772 596 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 TLE3Q04726 772 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 UBE3AQ05086 875 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 DEUP1Q05D60 604 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 DDX10Q13206 875 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 TRPC3Q13507 836 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 DCTN1Q14203 1278 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 GALNTL6Q49A17 601 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 CTXN3Q4LDR2 81 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 MAP3K21Q5TCX8 1036 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 Q6YL49 198 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 BBS12Q6ZW61 710 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 CPOQ8IVL8 374 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 SLC44A3Q8N4M1 653 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 MCRS1Q96EZ8 462 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 PDLIM2Q96JY6 352 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 NPAS1Q99742 590 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 MECRQ9BV79 373 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 FSD1LQ9BXM9 530 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 ZNF341Q9BYN7 854 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 UNC45AQ9H3U1 944 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 ABHD16BQ9H3Z7 469 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 VPS45Q9NRW7 570 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 ADAMTS5Q9UNA0 930 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 CRYL1Q9Y2S2 319 aa4.94□□□□□ -1.62
CDC42BPA-211ENST00000466538 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 FAM90A20PA6NIJ5 464 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 EYA2O00167 538 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 EPB41L2O43491 1005 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 NARSO43776 548 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 TSPAN3O60637 253 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 POLBP06746 335 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 RXRAP19793 462 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 PCP4P48539 62 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 DIO1P49895 249 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 RPL15P61313 204 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 CFHR3Q02985 330 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 CHRNDQ07001 517 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 SLC12A1Q13621 1099 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 PCID2Q5JVF3 399 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 WDR93Q6P2C0 686 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 DPY19L3Q6ZPD9 716 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 ZNF804AQ7Z570 1209 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 FSIP1Q8NA03 581 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 CEP70Q8NHQ1 597 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 SLC2A12Q8TD20 617 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 ACTRT2Q8TDY3 377 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D5Q92609 795 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 NPIPB3Q92617 1050 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 LENG8Q96PV6 779 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 TWNKQ96RR1 684 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 PIGSQ96S52 555 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 EIF2AK1Q9BQI3 630 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 SAP30LQ9HAJ7 183 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 GGA3Q9NZ52 723 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 TFCP2L1Q9NZI6 479 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 KCND3Q9UK17 655 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 ASAP1Q9ULH1 1129 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 SLC12A4Q9UP95 1085 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 RRP7AQ9Y3A4 280 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 LMTK3Q96Q04 1460 aa4.93□□□□□ -1.62
CDC42BPA-211ENST00000466538 CYP3A7-CYP3A51PA0A087WV96 503 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3DA0A087WVF3 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3IA0A087WXS9 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3EA0A087X179 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3KA0A087X1G2 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3BA6NDS4 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3FA6NER0 549 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TMEM191CA6NGB0 347 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 C3orf70A6NLC5 250 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3LB9A6J9 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 H0YIZ8 118 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 J3KRW8 73 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 M0QZQ0 153 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SUV39H1O43463 412 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 CA12O43570 354 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 C1RP00736 705 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 ADH4P08319 380 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3HP0C7X1 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 ALADP13716 330 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TNNT1P13805 278 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 ENGP17813 658 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 CYP3A7P24462 503 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 CNTFP26441 200 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 MCM7P33993 719 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 JAK3P52333 1124 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 SOX10P56693 466 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 LMAN2Q12907 356 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 FOXI1Q12951 378 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 ZNF169Q14929 603 aaPredicted RBP4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 ERCC6LQ2NKX8 1250 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3GQ6DHY5 549 aa4.92□□□□□ -1.62
CDC42BPA-211ENST00000466538 TBC1D3CQ6IPX1 549 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms