RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 BTBD3Q9Y2F9 522 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 PCDHA5Q9Y5H7 936 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 COL6A6A6NMZ7 2263 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 NPC1O15118 1278 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 EXOC3O60645 756 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 CLSTN1O94985 981 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 PRKCHP24723 683 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 ADORA2BP29275 332 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 CASP1P29466 404 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 OXTRP30559 389 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 ZNF132P52740 706 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 AP3M2P53677 418 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 ZNF234Q14588 700 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 HLA-BQ31612 363 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 C10orf120Q5SQS8 335 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 IL27RAQ6UWB1 636 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 SCD5Q86SK9 330 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 UNC93AQ86WB7 457 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 CACUL1Q86Y37 369 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 LINC00301Q8NCQ3 95 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 PIWIL1Q96J94 861 aaKnown RBP12.38□□□□□ -0.43
CNOT4-208ENST00000465721 LRIG1Q96JA1 1093 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 TWNKQ96RR1 684 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 PNPLA8Q9NP80 782 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
CNOT4-208ENST00000465721 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
CNOT4-208ENST00000465721 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 MTMR6Q9Y217 621 aa12.38□□□□□ -0.43
CNOT4-208ENST00000465721 A0A1B0GVT2 93 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 ASS1P00966 412 aaKnown RBP12.37□□□□□ -0.43
CNOT4-208ENST00000465721 P4HA1P13674 534 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 PLA2G4AP47712 749 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 DLG4P78352 724 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 AMPD3Q01432 767 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 INCA1Q0VD86 236 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 KNOP1Q1ED39 458 aaKnown RBP12.37□□□□□ -0.43
CNOT4-208ENST00000465721 ZACNQ401N2 412 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 CCDC186Q7Z3E2 898 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 ANKS1BQ7Z6G8 1248 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 ZNF276Q8N554 614 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
CNOT4-208ENST00000465721 CRELD1Q96HD1 420 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 HNRNPABQ99729 332 aaKnown RBP12.37□□□□□ -0.43
CNOT4-208ENST00000465721 CDC6Q99741 560 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
CNOT4-208ENST00000465721 A0A087WV48 116 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 C7P10643 843 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 CORO1AP31146 461 aaKnown RBP12.36□□□□□ -0.43
CNOT4-208ENST00000465721 CSNK1EP49674 416 aaKnown RBP12.36□□□□□ -0.43
CNOT4-208ENST00000465721 KIF11P52732 1056 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 EIF4HQ15056 248 aaKnown RBP12.36□□□□□ -0.43
CNOT4-208ENST00000465721 STK38Q15208 465 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 PTPRNQ16849 979 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 SHC4Q6S5L8 630 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 IQUBQ8NA54 791 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 UCMAQ8WVF2 138 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 SORCS1Q8WY21 1168 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 TAF4BQ92750 862 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 NUP58Q9BVL2 599 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 BLZF1Q9H2G9 400 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 ELOVL2Q9NXB9 296 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 CLIC5Q9NZA1 410 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 NAGPAQ9UK23 515 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
CNOT4-208ENST00000465721 NAV2Q8IVL1 2488 aa12.36□□□□□ -0.43
CNOT4-208ENST00000465721 TRABD2BA6NFA1 517 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SPTLC2O15270 562 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SYNCRIPO60506 623 aaKnown RBP12.35□□□□□ -0.43
CNOT4-208ENST00000465721 PPP6R2O75170 966 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 CHKAP35790 457 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 PSEN1P49768 467 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 AFF3P51826 1226 aaKnown RBP12.35□□□□□ -0.43
CNOT4-208ENST00000465721 CYP4F3Q08477 520 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 C1orf220Q5T0J3 134 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 LAYNQ6UX15 382 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 FAM124AQ86V42 546 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 SCUBE3Q8IX30 993 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 FAM217AQ8IXS0 508 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 GALNT15Q8N3T1 639 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 OR2T3Q8NH03 318 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 RHBDD1Q8TEB9 315 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 TMEM174Q8WUU8 243 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
CNOT4-208ENST00000465721 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
CNOT4-208ENST00000465721 C6orf106Q9H6K1 298 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms