RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 LRRCC1Q9C099 1032 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 DUSP22Q9NRW4 184 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 ATP8A2Q9NTI2 1148 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ARGLU1Q9NWB6 273 aaPredicted RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 SAGE1Q9NXZ1 904 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 CWC15Q9P013 229 aaKnown RBP3.61□□□□□ -1.83
SNX4-202ENST00000465505 WDR35Q9P2L0 1181 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 SSX2IPQ9Y2D8 614 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 C2CD2Q9Y426 696 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 DAAM1Q9Y4D1 1078 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 DGKBQ9Y6T7 804 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 ZNF521Q96K83 1311 aa3.61□□□□□ -1.83
SNX4-202ENST00000465505 MYO15BQ96JP2 1530 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 A0A1B0GVC2 190 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 LINC00854A0A1B0GVQ3 168 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 ANO9A1A5B4 782 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 TRIM64A6NGJ6 449 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 TRIM64BA6NI03 449 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 J3KRW8 73 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SMIM22K7EJ46 135 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 M0QYG6 137 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 KIF2AO00139 706 aaPredicted RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 QSOX1O00391 747 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 AKAP10O43572 662 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 STAM2O75886 525 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 DNAJB5O75953 348 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 INMTO95050 263 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SMC2O95347 1197 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 ONECUT2O95948 504 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 BMP15O95972 392 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 AHSGP02765 367 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 GNAI2P04899 355 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 PIM1P11309 404 aaPredicted RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 TYRP14679 529 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CAPN3P20807 821 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SFPQP23246 707 aaKnown RBP eCLIP3.6□□□□□ -1.83
SNX4-202ENST00000465505 HPDP32754 393 aaPredicted RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 HSPA1LP34931 641 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CTNNA1P35221 906 aaKnown RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 CD86P42081 329 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 KCNJ4P48050 445 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 LIMK1P53667 647 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 RCAN1P53805 252 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 RIPK4P57078 832 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 HOXA4Q00056 320 aaPredicted RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 PLIN5Q00G26 463 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 ICA1Q05084 483 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 ZBTB17Q13105 803 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 RABEP1Q15276 862 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CCDC152Q4G0S7 254 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 PCID2Q5JVF3 399 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 FAM102BQ5T8I3 360 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SPATA1Q5VX52 437 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SLC9A4Q6AI14 798 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 GALNT17Q6IS24 598 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CATSPERGQ6ZRH7 1159 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 USP45Q70EL2 814 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 MAATS1Q7Z4T9 603 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CCDC91Q7Z6B0 441 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 MYLK4Q86YV6 388 aaPredicted RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 KRT222Q8N1A0 295 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CPA6Q8N4T0 437 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 PJA1Q8NG27 643 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 ERMNQ8TAM6 284 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 GOLGA5Q8TBA6 731 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 RGMAQ96B86 450 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 RBM18Q96H35 190 aaKnown RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 ZMAT2Q96NC0 199 aaKnown RBP3.6□□□□□ -1.83
SNX4-202ENST00000465505 SLC46A1Q96NT5 459 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SH3GL1Q99961 368 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CDH19Q9H159 772 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 FANCFQ9NPI8 374 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 PNPOQ9NVS9 261 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 HESX1Q9UBX0 185 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 SH2B3Q9UQQ2 575 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 PCDHA1Q9Y5I3 950 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 EVC2Q86UK5 1308 aa3.6□□□□□ -1.83
SNX4-202ENST00000465505 CACNA1IQ9P0X4 2223 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 RASA4BC9J798 803 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 AKR1B15C9JRZ8 316 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 RASA4O43374 803 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 ERLIN1O75477 346 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 TOP3BO95985 862 aaKnown RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 POU2F2P09086 479 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 P4HA1P13674 534 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 PHKG2P15735 406 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 DESP17661 470 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 HDCP19113 662 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 CCND1P24385 295 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 SERPINB3P29508 390 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 S100A5P33763 92 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 GALNSP34059 522 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 HOXD12P35452 270 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 GNL1P36915 607 aaPredicted RBP3.59□□□□□ -1.83
SNX4-202ENST00000465505 CCT5P48643 541 aa3.59□□□□□ -1.83
SNX4-202ENST00000465505 MXI1P50539 228 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms