RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 C4orf50Q6ZRC1 276 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 DENND5BQ6ZUT9 1274 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 CCDC185Q8N715 623 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 ENDOVQ8N8Q3 282 aaKnown RBP18.93■□□□□ 0.62
SYNE4-204ENST00000465425 TTC8Q8TAM2 541 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 HTR3CQ8WXA8 447 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 C11orf84Q9BUA3 381 aaPredicted RBP18.93■□□□□ 0.62
SYNE4-204ENST00000465425 MAGEB5Q9BZ81 275 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 DCLRE1BQ9H816 532 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 MTMR10Q9NXD2 777 aa18.93■□□□□ 0.62
SYNE4-204ENST00000465425 RBM47A0AV96 593 aaKnown RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 FCHO1O14526 889 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 HCRTO43612 131 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 GNL1P36915 607 aaPredicted RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 SCNN1AP37088 669 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 GRIA1P42261 906 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 ACADSBP45954 432 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 ZBTB6Q15916 424 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 FBXO47Q5MNV8 452 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 BZW1Q7L1Q6 419 aaKnown RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 ARCQ7LC44 396 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 ARID3BQ8IVW6 561 aaPredicted RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 KIRREL3Q8IZU9 778 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 GTF3C2Q8WUA4 911 aaPredicted RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 PRR11Q96HE9 360 aaPredicted RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 APOL6Q9BWW8 343 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 DNAI2Q9GZS0 605 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 RNF19AQ9NV58 838 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 SETD4Q9NVD3 440 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 SIRPGQ9P1W8 387 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 CYB561D2O14569 222 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 GSC2O15499 205 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 ECM2O94769 699 aaPredicted RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 GOT1P17174 413 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 AMPD1P23109 780 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 DGKDQ16760 1214 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 NCBP2-AS2Q69YL0 99 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 TTC7BQ86TV6 843 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 CRLF3Q8IUI8 442 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 FERMT1Q9BQL6 677 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 NMUR2Q9GZQ4 415 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 SNX25Q9H3E2 840 aa18.92■□□□□ 0.62
SYNE4-204ENST00000465425 UBQLN1Q9UMX0 589 aaKnown RBP18.92■□□□□ 0.62
SYNE4-204ENST00000465425 RECQL4O94761 1208 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 LUC7L3O95232 432 aaKnown RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 MMP3P08254 477 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 CNTFP26441 200 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 CRHR1P34998 444 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 FDFT1P37268 417 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 ALYREFQ86V81 257 aaKnown RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 RAB3IL1Q8TBN0 382 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 FAM149B1Q96BN6 582 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 NAF1Q96HR8 494 aaKnown RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 WWP1Q9H0M0 922 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 NXF3Q9H4D5 531 aaKnown RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 ARMCX1Q9P291 453 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 DICER1Q9UPY3 1922 aaKnown RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 HACD1B0YJ81 288 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 F5H423 210 aaPredicted RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 STK10O94804 968 aaKnown RBP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 KITP10721 976 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 RFWD3Q6PCD5 774 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 STRADAQ7RTN6 431 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 FAM131BQ86XD5 332 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 HACE1Q8IYU2 909 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.91■□□□□ 0.62
SYNE4-204ENST00000465425 OR6J1Q8NGC5 347 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 SLC2A14Q8TDB8 520 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 CDKL2Q92772 493 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 MIEF2Q96C03 454 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 OSMRQ99650 979 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 MORF4L1Q9UBU8 362 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 GTF2IRD1Q9UHL9 959 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 TRIP11Q15643 1979 aa18.91■□□□□ 0.62
SYNE4-204ENST00000465425 A0A0A0MRY4 1105 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 WDR27A2RRH5 827 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 KPNA7A9QM74 516 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 AKAP5P24588 427 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 LMO2P25791 158 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 CDC42EP1Q00587 391 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 EFHC1Q5JVL4 640 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 DPP9Q86TI2 863 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 CRYBG2Q8N1P7 616 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 ARHGAP24Q8N264 748 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 PYROXD2Q8N2H3 581 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 STKLD1Q8NE28 680 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 PPP1R14CQ8TAE6 165 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 ZNF560Q96MR9 790 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 SPATA13Q96N96 652 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 ADAMTS10Q9H324 1103 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 TAS2R1Q9NYW7 299 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 RNF181Q9P0P0 153 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 MARCOQ9UEW3 520 aaPredicted RBP18.9■□□□□ 0.62
SYNE4-204ENST00000465425 NR2E3Q9Y5X4 410 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 HMX2A2RU54 273 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 RRN3P2A6NIE6 340 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 BIRC5O15392 142 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 CD4P01730 458 aa18.9■□□□□ 0.62
SYNE4-204ENST00000465425 MATKP42679 507 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms