RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 TBRG1Q3YBR2 411 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 ANKRD40Q6AI12 368 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 DGAT2L7PQ6IED9 249 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 CEP85Q6P2H3 762 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 ZNF627Q7L945 461 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 AMER2Q8N7J2 671 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM71DQ8N9W8 422 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 OR52L2PQ8NGH6 319 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 TBATAQ96M53 351 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 MMS19Q96T76 1030 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 THAP7Q9BT49 309 aaPredicted RBP4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 RNF26Q9BY78 433 aaPredicted RBP4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 SAP30LQ9HAJ7 183 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 G6PC2Q9NQR9 355 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 BAG5Q9UL15 447 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 ST3GAL5Q9UNP4 418 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 ZBTB1Q9Y2K1 713 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 PCDHB7Q9Y5E2 793 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 PCDHB2Q9Y5E7 798 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 ENTPD2Q9Y5L3 495 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 COL4A3Q01955 1670 aa4.18□□□□□ -1.74
HMGXB4-205ENST00000464480 CCDC187A0A096LP49 1063 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 LOC105369274A0A096LPK9 316 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 LOC102723532A0A0G2JNH3 316 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 MBD3L5A6NJ08 208 aaPredicted RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 SLC38A8A6NNN8 435 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 E7EVH7 732 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 NKX2-8O15522 239 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 SUV39H1O43463 412 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 PDE8BO95263 885 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 TFRCP02786 760 aaKnown RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 SOX10P56693 466 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 KRTAP10-2P60368 255 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 SIM1P81133 766 aaPredicted RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 CFHR3Q02985 330 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 SMAD1Q15797 465 aaKnown RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 GALNTL6Q49A17 601 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 RNASE12Q5GAN4 147 aaKnown RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 TSTD2Q5T7W7 516 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 CCDC70Q6NSX1 233 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 ACSM6Q6P461 480 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 NAPRTQ6XQN6 538 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 MMS22LQ6ZRQ5 1243 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 LRRTM4Q86VH4 590 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 RASAL3Q86YV0 1011 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 OR4N4Q8N0Y3 316 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 TMEM57Q8N5G2 664 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 C12orf76Q8N812 135 aaPredicted RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 CAGE1Q8TC20 777 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 GLMPQ8WWB7 406 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 NPIPB3Q92617 1050 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 RILPL2Q969X0 211 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 DAZAP1Q96EP5 407 aaKnown RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 MCRS1Q96EZ8 462 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 HS6ST2Q96MM7 605 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 CIPCQ9C0C6 399 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 TWSG1Q9GZX9 223 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 VPS45Q9NRW7 570 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 RASSF1Q9NS23 344 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 C9orf78Q9NZ63 289 aaPredicted RBP4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 PGAP2Q9UHJ9 254 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 HS3ST3A1Q9Y663 406 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 SALL3Q9BXA9 1300 aa4.17□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3DA0A087WVF3 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3IA0A087WXS9 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3EA0A087X179 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3KA0A087X1G2 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3BA6NDS4 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3FA6NER0 549 aaPredicted RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RRN3P2A6NIE6 340 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 C3orf70A6NLC5 250 aaPredicted RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TTC34A8MYJ7 566 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 B9A039 149 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3LB9A6J9 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 FOXN1O15353 648 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RAMP2O60895 175 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 KRT38O76015 456 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 GCP02774 474 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 ALDOAP04075 364 aaKnown RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 SLC3A2P08195 630 aaKnown RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 ELFN1P0C7U0 828 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3HP0C7X1 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RXRAP19793 462 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 ITPKBP27987 946 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 DUSP1P28562 367 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 GRK5P34947 590 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RARRES1P49788 294 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 JAK3P52333 1124 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RBM5P52756 815 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RBM6P78332 1123 aaKnown RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 GPC5P78333 572 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 FAM110CQ1W6H9 321 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3GQ6DHY5 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 TBC1D3CQ6IPX1 549 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 WDR93Q6P2C0 686 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 C16orf89Q6UX73 402 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 Q6ZPA2 131 aa4.16□□□□□ -1.74
HMGXB4-205ENST00000464480 MRGPRGQ86SM5 289 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms