RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TMPRSS12Q86WS5 348 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 C12orf29Q8N999 325 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 IGSF8Q969P0 613 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 JAKMIP2Q96AA8 810 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 CDK5RAP1Q96SZ6 601 aaKnown RBP15.21■□□□□ 0.03
SMC1A-204ENST00000463684 GZF1Q9H116 711 aaPredicted RBP15.21■□□□□ 0.03
SMC1A-204ENST00000463684 C6orf106Q9H6K1 298 aaPredicted RBP15.21■□□□□ 0.03
SMC1A-204ENST00000463684 NMUR1Q9HB89 426 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 TM9SF3Q9HD45 589 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 OSGEPQ9NPF4 335 aa15.21■□□□□ 0.03
SMC1A-204ENST00000463684 SETXQ7Z333 2677 aaKnown RBP15.2■□□□□ 0.02
SMC1A-204ENST00000463684 UBE4BO95155 1302 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 KCNK3O14649 394 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 STX6O43752 255 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 PCDHGA12O60330 932 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 PRKCHP24723 683 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 GRIA4P48058 902 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 SLC39A14Q15043 492 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 CLEC20AQ6ZU45 233 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 ADAT2Q7Z6V5 191 aaKnown RBP15.2■□□□□ 0.02
SMC1A-204ENST00000463684 OR2T3Q8NH03 318 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 ELMO3Q96BJ8 720 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 PIWIL1Q96J94 861 aaKnown RBP15.2■□□□□ 0.02
SMC1A-204ENST00000463684 SLC2A11Q9BYW1 496 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 LHX5Q9H2C1 402 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 KBTBD4Q9NVX7 518 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 FTSJ1Q9UET6 329 aa15.2■□□□□ 0.02
SMC1A-204ENST00000463684 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.2■□□□□ 0.02
SMC1A-204ENST00000463684 PTPRBP23467 1997 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 HHLA1C9JL84 531 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 PLK4O00444 970 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 DFNA5O60443 496 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 KLKB1P03952 638 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 C4BPAP04003 597 aaKnown RBP15.19■□□□□ 0.02
SMC1A-204ENST00000463684 RPN1P04843 607 aaKnown RBP15.19■□□□□ 0.02
SMC1A-204ENST00000463684 HMBSP08397 361 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 JUPP14923 745 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 CORO1AP31146 461 aaKnown RBP15.19■□□□□ 0.02
SMC1A-204ENST00000463684 ACSL1P33121 698 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 HNF1BP35680 557 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 C6orf118Q5T5N4 469 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 FAM173BQ6P4H8 233 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 C12orf56Q8IXR9 622 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 ZNF276Q8N554 614 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 PARD3BQ8TEW8 1205 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 DDI1Q8WTU0 396 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 SORCS1Q8WY21 1168 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 TAF4BQ92750 862 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 NXPE2Q96DL1 559 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 CYFIP2Q96F07 1278 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 P2RY11Q96G91 374 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 HNRNPABQ99729 332 aaKnown RBP15.19■□□□□ 0.02
SMC1A-204ENST00000463684 BTBD1Q9H0C5 482 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 PNPLA8Q9NP80 782 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 TFIP11Q9UBB9 837 aaKnown RBP15.19■□□□□ 0.02
SMC1A-204ENST00000463684 RASAL2Q9UJF2 1139 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 PLA2G4CQ9UP65 541 aa15.19■□□□□ 0.02
SMC1A-204ENST00000463684 MORC2Q9Y6X9 1032 aaPredicted RBP15.19■□□□□ 0.02
SMC1A-204ENST00000463684 URB1O60287 2271 aaKnown RBP15.18■□□□□ 0.02
SMC1A-204ENST00000463684 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
SMC1A-204ENST00000463684 H0Y8X5 98 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 ATXN7O15265 892 aaPredicted RBP15.18■□□□□ 0.02
SMC1A-204ENST00000463684 RRP8O43159 456 aaKnown RBP15.18■□□□□ 0.02
SMC1A-204ENST00000463684 FSBPO95073 299 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 KIF20AO95235 890 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 VNN1O95497 513 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 SEMA4FO95754 770 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 CD27P26842 260 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 ITPKBP27987 946 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 C21orf59P57076 290 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 FNDC3BQ53EP0 1204 aaKnown RBP15.18■□□□□ 0.02
SMC1A-204ENST00000463684 DENND1CQ8IV53 801 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 BIRC7Q96CA5 298 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 DNAI2Q9GZS0 605 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 CLIC5Q9NZA1 410 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 HMGXB4Q9UGU5 601 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 AGO1Q9UL18 857 aaKnown RBP15.18■□□□□ 0.02
SMC1A-204ENST00000463684 SLCO1B1Q9Y6L6 691 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 APC2O95996 2303 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 ACACAQ13085 2346 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 BPTFQ12830 3046 aa15.18■□□□□ 0.02
SMC1A-204ENST00000463684 CAPN9O14815 690 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 DNTTP04053 509 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CDK4P11802 303 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 EIF2S3P41091 472 aaKnown RBP15.17■□□□□ 0.02
SMC1A-204ENST00000463684 KIF11P52732 1056 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 BCAT1P54687 386 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CLDN10P78369 228 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 IL9RQ01113 521 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 SEMG2Q02383 582 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 EFEMP1Q12805 493 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CAMK2GQ13555 558 aaPredicted RBP15.17■□□□□ 0.02
SMC1A-204ENST00000463684 KNOP1Q1ED39 458 aaKnown RBP15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CCDC186Q7Z3E2 898 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 SCD5Q86SK9 330 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 ZNF605Q86T29 641 aa15.17■□□□□ 0.02
SMC1A-204ENST00000463684 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
SMC1A-204ENST00000463684 CPXM2Q8N436 756 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms