RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PCK1P35558 622 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 MAGEA4P43358 317 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 BRCC3P46736 316 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SLC18A1P54219 525 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CBLBQ13191 982 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SMAD4Q13485 552 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 TMEM132DQ14C87 1099 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 LLGL1Q15334 1064 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 STILQ15468 1287 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SMAD2Q15796 467 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 KYNUQ16719 465 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 QPCTQ16769 361 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SKIDA1Q1XH10 827 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 P3H1Q32P28 736 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 WDR72Q3MJ13 1102 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ATP13A4Q4VNC1 1196 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 LILRA6Q6PI73 481 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SYCE2Q6PIF2 218 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 GSTA5Q7RTV2 222 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CEP57Q86XR8 500 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 XYLT1Q86Y38 959 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CMASQ8NFW8 434 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ARHGEF2Q92974 986 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 TMEM176AQ96HP8 235 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CABS1Q96KC9 395 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 SUSD3Q96L08 255 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 B3GALT6Q96L58 329 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 CLSTN3Q9BQT9 956 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 NSRP1Q9H0G5 558 aaKnown RBP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 FETUBQ9UGM5 382 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 DPP7Q9UHL4 492 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 POLIQ9UNA4 740 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPRD-207ENST00000463477 ZNF148Q9UQR1 794 aa10.31□□□□□ -0.76
PTPRD-207ENST00000463477 MUC3AQ02505 3323 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 PIRO00625 290 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 LRCH4O75427 683 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 ENDOD1O94919 500 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 KRT10P13645 584 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 CD19P15391 556 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 TCF4P15884 667 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 PSMA2P25787 234 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 RDXP35241 583 aaKnown RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 GJC1P36383 396 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 PSMC1P62191 440 aaKnown RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 IFT88Q13099 833 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 MRPL58Q14197 206 aaKnown RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 TRIP13Q15645 432 aaPredicted RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 LONRF1Q17RB8 773 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 TTC31Q49AM3 519 aaPredicted RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 ZNF394Q53GI3 561 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 RNASEH2BQ5TBB1 312 aaKnown RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 SCARA5Q6ZMJ2 495 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 CCDC121Q6ZUS5 278 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 ANKS3Q6ZW76 656 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 VSIG1Q86XK7 387 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 CCDC197Q8NCU1 140 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 RBM15Q96T37 977 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 SDCBP2Q9H190 292 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 KDM4CQ9H3R0 1056 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 DZANK1Q9NVP4 752 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 NXF1Q9UBU9 619 aaKnown RBP10.3□□□□□ -0.76
PTPRD-207ENST00000463477 CYTH4Q9UIA0 394 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 BACE2Q9Y5Z0 518 aa10.3□□□□□ -0.76
PTPRD-207ENST00000463477 LRRD1A4D1F6 860 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 SMIM23A6NLE4 172 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 PI4K2BG5E9Z4 385 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 M0QZQ0 153 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ALOX15BO15296 676 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ITGB3P05106 788 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 EPCAMP16422 314 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 TSHRP16473 764 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 KDELR1P24390 212 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 GPD2P43304 727 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 SLCO1A2P46721 670 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ARSEP51690 589 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 LILRA4P59901 499 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 RBP5P82980 135 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ACTN3Q08043 901 aaPredicted RBP10.29□□□□□ -0.76
PTPRD-207ENST00000463477 PSMD5Q16401 504 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 C9orf57Q5W0N0 161 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 PRSS55Q6UWB4 352 aaPredicted RBP10.29□□□□□ -0.76
PTPRD-207ENST00000463477 VSTM1Q6UX27 236 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 CNPY4Q8N129 248 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ARFGAP1Q8N6T3 406 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ANKS4BQ8N8V4 417 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 UHMK1Q8TAS1 419 aaKnown RBP10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ADAMTS19Q8TE59 1207 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 SUSD6Q92537 303 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 CPXM1Q96SM3 734 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 NCAPGQ9BPX3 1015 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ELOVL4Q9GZR5 314 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 SMYD3Q9H7B4 428 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 ASNSD1Q9NWL6 643 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 SENP1Q9P0U3 644 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 MTRRQ9UBK8 725 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 PRKAG3Q9UGI9 489 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms