RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 TBC1D3EA0A087X179 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3KA0A087X1G2 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3BA6NDS4 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3FA6NER0 549 aaPredicted RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 SH2D7A6NKC9 451 aaPredicted RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3LB9A6J9 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 M0QZQ0 153 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 RFXAPO00287 272 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 DKC1O60832 514 aaKnown RBP eCLIP6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3HP0C7X1 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 MED14OSP0DP75 135 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 GPD2P43304 727 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 DGKQP52824 942 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 RPS3AP61247 264 aaKnown RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 SP2Q02086 613 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 CREB5Q02930 508 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 BFSP2Q13515 415 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 DCTN2Q13561 401 aaKnown RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 BECN1Q14457 450 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 AASDHQ4L235 1098 aaPredicted RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3GQ6DHY5 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3CQ6IPX1 549 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 PLEKHH3Q7Z736 793 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TBC1D3Q8IZP1 549 aaPredicted RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 SUPT20HQ8NEM7 779 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 ETNPPLQ8TBG4 499 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 ATG4AQ8WYN0 398 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 ARRDC3Q96B67 414 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 FAM136AQ96C01 138 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 MASTLQ96GX5 879 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 ZMAT2Q96NC0 199 aaKnown RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 OR14A2Q96R54 314 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 AMBRA1Q9C0C7 1298 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 SYNPO2LQ9H987 977 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 TRIM36Q9NQ86 728 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 GIMAP2Q9UG22 337 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 SLC12A4Q9UP95 1085 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 ENTPD2Q9Y5L3 495 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 MAGED1Q9Y5V3 778 aaPredicted RBP6.31□□□□□ -1.4
COPS3-205ENST00000463097 FER1L4A9Z1Z3 1794 aa6.31□□□□□ -1.4
COPS3-205ENST00000463097 MYADML2A6NDP7 307 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 PABPN1LA6NDY0 278 aaKnown RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 ZNF185O15231 689 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 NKX2-8O15522 239 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 TSPAN9O75954 239 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 MCCP23508 829 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 APOBEC3AP31941 199 aaPredicted RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 PCP4P48539 62 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 IRAK1P51617 712 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 RCAN1P53805 252 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 RARSP54136 660 aaKnown RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 CDH15P55291 814 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 ZBED6P86452 979 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 MC1RQ01726 317 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 ROR1Q01973 937 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 MESP2Q0VG99 397 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 CHAF1BQ13112 559 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 THOC5Q13769 683 aaKnown RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 TBCCQ15814 346 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 KRT74Q7RTS7 529 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 MAPKAPK5Q8IW41 473 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 GSPT2Q8IYD1 628 aaKnown RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 TTC39CQ8N584 583 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 TP53I13Q8NBR0 393 aaPredicted RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 MIEF2Q96C03 454 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 ELP4Q96EB1 424 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 SEMA4BQ9NPR2 832 aaPredicted RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 BEX4Q9NWD9 120 aaPredicted RBP6.3□□□□□ -1.4
COPS3-205ENST00000463097 KCNE5Q9UJ90 142 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 PCDHGB4Q9UN71 923 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 SNX8Q9Y5X2 465 aa6.3□□□□□ -1.4
COPS3-205ENST00000463097 FAM90A7PA6NKC0 464 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 FAM90A22PA8MWA6 464 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 FAM90A12PA8MX19 464 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 FAM90A23PA8MXZ1 464 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 PTGES3LE9PB15 166 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 PPM1DO15297 605 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 ZFPL1O95159 310 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 VNN1O95497 513 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 CYP3A4P08684 503 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 PEPDP12955 493 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 ALADP13716 330 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 GLULP15104 373 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 MMP8P22894 467 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 GRK5P34947 590 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 MSX2P35548 267 aaPredicted RBP6.29□□□□□ -1.4
COPS3-205ENST00000463097 AFF3P51826 1226 aaKnown RBP6.29□□□□□ -1.4
COPS3-205ENST00000463097 NLRP5P59047 1200 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 IFI35P80217 286 aaPredicted RBP6.29□□□□□ -1.4
COPS3-205ENST00000463097 FOXL1Q12952 345 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 PSMD6Q15008 389 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 ST3GAL2Q16842 350 aa6.29□□□□□ -1.4
COPS3-205ENST00000463097 NAIF1Q69YI7 327 aaPredicted RBP6.29□□□□□ -1.4
COPS3-205ENST00000463097 GRHL2Q6ISB3 625 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms