RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PRLRP16471 622 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 HDCP19113 662 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 WEE1P30291 646 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 ARSEP51690 589 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 ZXDBP98169 803 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 AMPD2Q01433 879 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 SCAPQ12770 1279 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 NME3Q13232 169 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 PPP2R5DQ14738 602 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 TEAD2Q15562 447 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 BRMS1LQ5PSV4 323 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 STXBP5Q5T5C0 1151 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 FAM131BQ86XD5 332 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 PSTKQ8IV42 348 aaKnown RBP14.92□□□□□ -0.02
COL6A1-202ENST00000463060 ARL14EPQ8N8R7 260 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-202ENST00000463060 ITFG1Q8TB96 612 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 TEKT4Q8WW24 435 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 TASP1Q9H6P5 420 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 FAM204AQ9H8W3 233 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 PIDD1Q9HB75 910 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL6A1-202ENST00000463060 MTMR10Q9NXD2 777 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 CLDND1Q9NY35 253 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 PCSK1NQ9UHG2 260 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 CDH22Q9UJ99 828 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 FZD10Q9ULW2 581 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 CLUHO75153 1309 aa14.92□□□□□ -0.02
COL6A1-202ENST00000463060 SLC12A8A0AV02 714 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 C3orf70A6NLC5 250 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 PRPSAP2O60256 369 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 KRT7P08729 469 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 RARAP10276 462 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 DESP17661 470 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 CEBPBP17676 345 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 KPNA1P52294 538 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 AIF1P55008 147 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 TBX4P57082 545 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 COG7P83436 770 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 RPS6KA1Q15418 735 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 HADHQ16836 314 aaKnown RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 ZC3H12AQ5D1E8 599 aaKnown RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 ERMARDQ5T6L9 678 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 DCAF12L1Q5VU92 463 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 SCYL2Q6P3W7 929 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 MIB1Q86YT6 1006 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 KATNAL2Q8IYT4 538 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 CCDC185Q8N715 623 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 MAB21L3Q8N8X9 362 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 ZSWIM3Q96MP5 696 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 GCNAQ96QF7 691 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 NAPGQ99747 312 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 SNRNP25Q9BV90 132 aaKnown RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 APOL5Q9BWW9 433 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 MAGEB5Q9BZ81 275 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 WDCPQ9H6R7 721 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 TMPRSS4Q9NRS4 437 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 GKN1Q9NS71 199 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 ZMYM5Q9UJ78 669 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 RASAL2Q9UJF2 1139 aa14.91□□□□□ -0.02
COL6A1-202ENST00000463060 MRPS23Q9Y3D9 190 aaKnown RBP14.91□□□□□ -0.02
COL6A1-202ENST00000463060 SYNJ2BP-COX16A0A087WUM0 186 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 CTAGE9A4FU28 777 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 STC2O76061 302 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 KLKB1P03952 638 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 CASQ1P31415 396 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 L1CAMP32004 1257 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 CCR1P32246 355 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 KCNQ1P51787 676 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 TAZQ16635 292 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 CA9Q16790 459 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 GPR158Q5T848 1215 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 CMTM8Q8IZV2 173 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 DEFB123Q8N688 67 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 SMRP1Q8NCR6 262 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 WBP2Q969T9 261 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 AZIN2Q96A70 460 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 HAPLN3Q96S86 360 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 OSBPL2Q9H1P3 480 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 TRPC7Q9HCX4 862 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 COX16Q9P0S2 106 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 SNX12Q9UMY4 172 aa14.9□□□□□ -0.02
COL6A1-202ENST00000463060 TRAV19A0A0A6YYK7 116 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 SLC2A3P11169 496 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 PYGMP11217 842 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 MBL2P11226 248 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-202ENST00000463060 TCF3P15923 654 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 FSHRP23945 695 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 IL4RP24394 825 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
COL6A1-202ENST00000463060 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
COL6A1-202ENST00000463060 RWDD2BP57060 319 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 SEMA3BQ13214 749 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 DPYSL2Q16555 572 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 ARHGAP15Q53QZ3 475 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 KCNT1Q5JUK3 1230 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 ATAT1Q5SQI0 421 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 SND1Q7KZF4 910 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL6A1-202ENST00000463060 ANKS1BQ7Z6G8 1248 aa14.89□□□□□ -0.03
COL6A1-202ENST00000463060 NPAS3Q8IXF0 933 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms