RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 A0A1W2PQF6 199 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 TCRBV21S2A2A0A5A6 115 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 YJEFN3A6XGL0 299 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 E7ENQ6 273 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 TM4SF5O14894 197 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 KHNYNO15037 678 aaKnown RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MED7O43513 233 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 ZNF217O75362 1048 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 GABBR2O75899 941 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 FBXO21O94952 628 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 LATS1O95835 1130 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 LCP1P13796 627 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 PRKCSHP14314 528 aaPredicted RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 HOXB2P14652 356 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 ACADSBP45954 432 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 RPL34P49207 117 aaKnown RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MFAP3P55082 362 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 DAOAP59103 153 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 ADIGQ0VDE8 80 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 CAMK4Q16566 473 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MEA1Q16626 185 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MAP7D1Q3KQU3 841 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MPPE1Q53F39 396 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 ADGRF1Q5T601 910 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 STPG1Q5TH74 334 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 EGFLAMQ63HQ2 1017 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 IL31Q6EBC2 164 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MSANTD2Q6P1R3 559 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 TOGARAM2Q6ZUX3 1019 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 FMNL3Q8IVF7 1028 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 UNC45BQ8IWX7 931 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 FAM217AQ8IXS0 508 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 CHPFQ8IZ52 775 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 RBBP8NLQ8NC74 664 aaPredicted RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 IPO4Q8TEX9 1081 aaKnown RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 DDI1Q8WTU0 396 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 STK32AQ8WU08 396 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 HMGB4Q8WW32 186 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 RLN3Q8WXF3 142 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 GOLGA1Q92805 767 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 KAT5Q92993 513 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 AZIN2Q96A70 460 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 TMA16Q96EY4 203 aaKnown RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 KREMEN1Q96MU8 473 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 GABRG3Q99928 467 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 INTS2Q9H0H0 1204 aaKnown RBP7.61□□□□□ -1.19
PTPRF-210ENST00000463041 ZDHHC4Q9NPG8 344 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 ELOVL2Q9NXB9 296 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 PLK2Q9NYY3 685 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 SFMBT1Q9UHJ3 866 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 STOML2Q9UJZ1 356 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 CABIN1Q9Y6J0 2220 aa7.61□□□□□ -1.19
PTPRF-210ENST00000463041 MED19A0JLT2 244 aaPredicted RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 GTPBP10A4D1E9 387 aaKnown RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 M0QYV0 167 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 AP5Z1O43299 807 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 LTFP02788 710 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 GABRG2P18507 467 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 BCKDHBP21953 392 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 BRD2P25440 801 aaKnown RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 WASP42768 502 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 GPD2P43304 727 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 DHPSP49366 369 aaPredicted RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 RGS7P49802 495 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 RING1Q06587 406 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 ENPP2Q13822 863 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 EIF4HQ15056 248 aaKnown RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 CCDC6Q16204 474 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 MPP7Q5T2T1 576 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 GBP6Q6ZN66 633 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 BEND5Q7L4P6 421 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 CYP2U1Q7Z449 544 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 METTL3Q86U44 580 aaKnown RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 CREBRFQ8IUR6 639 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 SYT12Q8IV01 421 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 ARHGEF19Q8IW93 802 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 ZNF606Q8WXB4 792 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 EDEM1Q92611 657 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 BHMTQ93088 406 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 PIWIL1Q96J94 861 aaKnown RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 ACOX2Q99424 681 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 ZSWIM1Q9BR11 485 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 CD248Q9HCU0 757 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 THAP10Q9P2Z0 257 aaPredicted RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 MBD1Q9UIS9 605 aaPredicted RBP7.6□□□□□ -1.19
PTPRF-210ENST00000463041 STON1Q9Y6Q2 735 aa7.6□□□□□ -1.19
PTPRF-210ENST00000463041 ACACBO00763 2458 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 CKAP5Q14008 2032 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 WASH3PC4AMC7 463 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 IRAK2O43187 625 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 LETM1O95202 739 aaPredicted RBP7.59□□□□□ -1.19
PTPRF-210ENST00000463041 IGLV3-27P01718 113 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 KRT5P13647 590 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 SLC9A1P19634 815 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 HOXD12P35452 270 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 SLC11A2P49281 568 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 TBX4P57082 545 aa7.59□□□□□ -1.19
PTPRF-210ENST00000463041 ARID5AQ03989 594 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms