RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 AFMP43652 599 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 CSNK1EP49674 416 aaKnown RBP16.48■□□□□ 0.23
SND1-203ENST00000463020 KIF11P52732 1056 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 SNRPFP62306 86 aaKnown RBP16.48■□□□□ 0.23
SND1-203ENST00000463020 STK4Q13043 487 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 DBX2Q6ZNG2 339 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 TMPRSS7Q7RTY8 843 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 HNRNPABQ99729 332 aaKnown RBP16.48■□□□□ 0.23
SND1-203ENST00000463020 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 C6orf106Q9H6K1 298 aaPredicted RBP16.48■□□□□ 0.23
SND1-203ENST00000463020 DNMT3LQ9UJW3 386 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 NAGPAQ9UK23 515 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
SND1-203ENST00000463020 MYH10P35580 1976 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 KNL1Q8NG31 2342 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 BCAT2O15382 392 aaPredicted RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 ZBTB24O43167 697 aaPredicted RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 IGLV3-19P01714 112 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 HLA-DRAP01903 254 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 CORO1AP31146 461 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 PLA2G4AP47712 749 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 CLDN6P56747 220 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 CAMK2BQ13554 666 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 KIF19Q2TAC6 998 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 KLHDC10Q6PID8 442 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 ZC3H3Q8IXZ2 948 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 ZNF366Q8N895 744 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 IQUBQ8NA54 791 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 CADM4Q8NFZ8 388 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 SIPA1Q96FS4 1042 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 INTS4Q96HW7 963 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 ZDHHC5Q9C0B5 715 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 KCTD10Q9H3F6 313 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 RASAL2Q9UJF2 1139 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 AGO1Q9UL18 857 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.47■□□□□ 0.23
SND1-203ENST00000463020 APOBEC2Q9Y235 224 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 SNX11Q9Y5W9 270 aa16.47■□□□□ 0.23
SND1-203ENST00000463020 ASH1LQ9NR48 2969 aaKnown RBP16.47■□□□□ 0.23
SND1-203ENST00000463020 TMEM131Q92545 1883 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 PPP6R2O75170 966 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 ACSL1P33121 698 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 MATKP42679 507 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 CYP4F3Q08477 520 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 EFEMP1Q12805 493 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 STARD3Q14849 445 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 FOXD4L6Q3SYB3 417 aaPredicted RBP16.46■□□□□ 0.23
SND1-203ENST00000463020 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
SND1-203ENST00000463020 FOXD4L3Q6VB84 417 aaPredicted RBP16.46■□□□□ 0.23
SND1-203ENST00000463020 UNC93AQ86WB7 457 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
SND1-203ENST00000463020 NDRG1Q92597 394 aaKnown RBP16.46■□□□□ 0.23
SND1-203ENST00000463020 CYFIP2Q96F07 1278 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
SND1-203ENST00000463020 NFE2L3Q9Y4A8 694 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 USP3Q9Y6I4 520 aa16.46■□□□□ 0.23
SND1-203ENST00000463020 STX6O43752 255 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 CUTAO60888 179 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 ZNF883P0CG24 379 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 CD58P19256 250 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 AMPD3Q01432 767 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 PPP1R26Q5T8A7 1209 aaPredicted RBP16.45■□□□□ 0.22
SND1-203ENST00000463020 CCDC186Q7Z3E2 898 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 DENND1CQ8IV53 801 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 TAS1R2Q8TE23 839 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 SNX19Q92543 992 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 PRCCQ92733 491 aaPredicted RBP16.45■□□□□ 0.22
SND1-203ENST00000463020 ELOVL2Q9NXB9 296 aa16.45■□□□□ 0.22
SND1-203ENST00000463020 FLNBO75369 2602 aaKnown RBP16.45■□□□□ 0.22
SND1-203ENST00000463020 TRABD2BA6NFA1 517 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 KIF20AO95235 890 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 CER1O95813 267 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 PRB1P04280 392 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 EPHX1P07099 455 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 PIK3CAP42336 1068 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 AP3M2P53677 418 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 IL9RQ01113 521 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 PPP3CAQ08209 521 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 BHLHA9Q7RTU4 235 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 RHBDD1Q8TEB9 315 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 CYB5D2Q8WUJ1 264 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 ORAI3Q9BRQ5 295 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 CIPCQ9C0C6 399 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 ZSCAN16Q9H4T2 348 aaPredicted RBP16.44■□□□□ 0.22
SND1-203ENST00000463020 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
SND1-203ENST00000463020 TENM4Q6N022 2769 aa16.44■□□□□ 0.22
SND1-203ENST00000463020 PVALEFA0A1B0GWK0 134 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 TULP2O00295 520 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms