RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 RRN3Q9NYV6 651 aa9.33□□□□□ -0.92
DDX39B-216ENST00000462421 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
DDX39B-216ENST00000462421 SFMBT1Q9UHJ3 866 aa9.33□□□□□ -0.92
DDX39B-216ENST00000462421 AGO1Q9UL18 857 aaKnown RBP9.33□□□□□ -0.92
DDX39B-216ENST00000462421 SYNJ2BP-COX16A0A087WUM0 186 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 YJEFN3A6XGL0 299 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 E5RJQ4 531 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 E7ENQ6 273 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 F5H5T6 163 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 H0Y626 953 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 LRP3O75074 770 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 ZNF217O75362 1048 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 SERPINC1P01008 464 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 GLI1P08151 1106 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 POLR2EP19388 210 aaKnown RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 STAT1P42224 750 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 SLC6A11P48066 632 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 PXNP49023 591 aaPredicted RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 ZNF132P52740 706 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 YWHAZP63104 245 aaKnown RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 RING1Q06587 406 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 PDCLQ13371 301 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 NNTQ13423 1086 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 FZD5Q13467 585 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 DRAP1Q14919 205 aaPredicted RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 CRY1Q16526 586 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 FNDC3BQ53EP0 1204 aaKnown RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 ADGRF1Q5T601 910 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 PPP1R2P3Q6NXS1 205 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 CAVIN1Q6NZI2 390 aaKnown RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 PMF1Q6P1K2 205 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 SERPINA13PQ6UXR4 307 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 SLC36A4Q6YBV0 504 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 LPCAT2Q7L5N7 544 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 RABEPKQ7Z6M1 372 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 CHSY1Q86X52 802 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 ERICH1Q86X53 443 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 ZNF677Q86XU0 584 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 MAML2Q8IZL2 1156 aaPredicted RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 AHI1Q8N157 1196 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 UBR7Q8N806 425 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 C1orf131Q8NDD1 294 aaKnown RBP9.32□□□□□ -0.92
DDX39B-216ENST00000462421 LMO3Q8TAP4 145 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 RIN3Q8TB24 985 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 SHC3Q92529 594 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 LOXL4Q96JB6 756 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 OSER1Q9NX31 292 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 PLK2Q9NYY3 685 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 COX16Q9P0S2 106 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 CNTN6Q9UQ52 1028 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 TLR6Q9Y2C9 796 aa9.32□□□□□ -0.92
DDX39B-216ENST00000462421 ZNF318Q5VUA4 2279 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TULP2O00295 520 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 GFRA2O00451 464 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 AP5Z1O43299 807 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 MSI1O43347 362 aaKnown RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TSPAN3O60637 253 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TBL1XO60907 577 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 RNASEH1O60930 286 aaKnown RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 LILRB5O75023 590 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 LSM8O95777 96 aaKnown RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 F9P00740 461 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 UCHL3P15374 230 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 CCR1P32246 355 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 GPD2P43304 727 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 ATXN3P54252 364 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 POLR2FP61218 127 aaKnown RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 ZXDBP98169 803 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TYRO3Q06418 890 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 SKOR2Q2VWA4 1001 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 DCAF6Q58WW2 860 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 SYCP2LQ5T4T6 812 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 ACBD5Q5T8D3 534 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 KLHDC7AQ5VTJ3 777 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TTC39BQ5VTQ0 682 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TAF3Q5VWG9 929 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 IL31Q6EBC2 164 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 MSANTD2Q6P1R3 559 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 DENND1BQ6P3S1 775 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 GJB7Q6PEY0 223 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 KIAA1324Q6UXG2 1013 aaKnown RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 LRRC31Q6UY01 552 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TRIM72Q6ZMU5 477 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 Q6ZNB5 142 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 CYP2U1Q7Z449 544 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 MFN1Q8IWA4 741 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 ZNF687Q8N1G0 1237 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 AOPEPQ8N6M6 819 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 GPT2Q8TD30 523 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 DCBLD2Q96PD2 775 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 STK33Q9BYT3 514 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 TPSD1Q9BZJ3 242 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 LHX5Q9H2C1 402 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 FAM207AQ9NSI2 230 aaPredicted RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 SAMSN1Q9NSI8 373 aaKnown RBP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.31□□□□□ -0.92
DDX39B-216ENST00000462421 ASNSD1Q9NWL6 643 aa9.31□□□□□ -0.92
DDX39B-216ENST00000462421 DDIT4Q9NX09 232 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms