RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 GDPD5Q8WTR4 605 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 TMEM176AQ96HP8 235 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 PCDH18Q9HCL0 1135 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 PNPOQ9NVS9 261 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 IL1RAPL1Q9NZN1 696 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 APOBEC2Q9Y235 224 aaKnown RBP19.05■□□□□ 0.64
HPS3-204ENST00000462030 PCDHA11Q9Y5I1 949 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 B4GALT4O60513 344 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 CILPO75339 1184 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 NFICP08651 508 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 UQCRBP14927 111 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 UBA1P22314 1058 aaKnown RBP19.05■□□□□ 0.64
HPS3-204ENST00000462030 ARRB2P32121 409 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 SERPINB9P50453 376 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 BACE1P56817 501 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 MED21Q13503 144 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 PGM2L1Q6PCE3 622 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 ILDR2Q71H61 639 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 NGRNQ9NPE2 291 aaKnown RBP19.05■□□□□ 0.64
HPS3-204ENST00000462030 NRBP2Q9NSY0 501 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 CDH22Q9UJ99 828 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 AFG3L2Q9Y4W6 797 aa19.05■□□□□ 0.64
HPS3-204ENST00000462030 F5H423 210 aaPredicted RBP19.04■□□□□ 0.64
HPS3-204ENST00000462030 ALDOAP04075 364 aaKnown RBP19.04■□□□□ 0.64
HPS3-204ENST00000462030 CYP3A5P20815 502 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 SMAD1Q15797 465 aaKnown RBP19.04■□□□□ 0.64
HPS3-204ENST00000462030 STXBP2Q15833 593 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 CCDC14Q49A88 953 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 TCHHL1Q5QJ38 904 aaPredicted RBP19.04■□□□□ 0.64
HPS3-204ENST00000462030 VWA5B1Q5TIE3 1220 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 SLC9A4Q6AI14 798 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 TIFABQ6ZNK6 161 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 MAP7D3Q8IWC1 876 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 KLHL4Q9C0H6 718 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
HPS3-204ENST00000462030 TPP1O14773 563 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 KLHL2O95198 593 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 HSPA1LP34931 641 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 GMPRP36959 345 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 STAT5BP51692 787 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 HMGCS2P54868 508 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 PCLAFQ15004 111 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 MPZL3Q6UWV2 235 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 AGBL3Q8NEM8 1001 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.03■□□□□ 0.64
HPS3-204ENST00000462030 HEXIM2Q96MH2 286 aaKnown RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 SORT1Q99523 831 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 SNRNP25Q9BV90 132 aaKnown RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 NR2E3Q9Y5X4 410 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 SF3B1O75533 1304 aaKnown RBP eCLIP19.03■□□□□ 0.64
HPS3-204ENST00000462030 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 ZMPSTE24O75844 475 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 ITGB3P05106 788 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 GJB1P08034 283 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 ICAM3P32942 547 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 IDH3AP50213 366 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 CRADDP78560 199 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 PDE1CQ14123 709 aaPredicted RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 PPP6R3Q5H9R7 873 aaPredicted RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 HPS6Q86YV9 775 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 OLFM3Q96PB7 478 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 NDNQ99608 321 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 SIKE1Q9BRV8 207 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 UBE2OQ9C0C9 1292 aaKnown RBP19.03■□□□□ 0.64
HPS3-204ENST00000462030 OCEL1Q9H607 264 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 MOCS1Q9NZB8 636 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 ITGA11Q9UKX5 1188 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 POMPQ9Y244 141 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 TRIP11Q15643 1979 aa19.03■□□□□ 0.64
HPS3-204ENST00000462030 PLIN3O60664 434 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 FARP2O94887 1054 aaPredicted RBP19.02■□□□□ 0.64
HPS3-204ENST00000462030 SPATA31D3P0C874 917 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 VCLP18206 1134 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 PROZP22891 400 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 OAZ1P54368 228 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 BTKQ06187 659 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 PRKG1Q13976 671 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 PDK2Q15119 407 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 TRIP10Q15642 601 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 PDCD2Q16342 344 aaPredicted RBP19.02■□□□□ 0.64
HPS3-204ENST00000462030 MAP1SQ66K74 1059 aaPredicted RBP19.02■□□□□ 0.64
HPS3-204ENST00000462030 PDPK2PQ6A1A2 396 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 SPATA31D4Q6ZUB0 917 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 ZBTB8OSQ8IWT0 167 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 DEFB107AQ8IZN7 70 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 ACTRT2Q8TDY3 377 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 HAPLN3Q96S86 360 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 TEX13BQ9BXU2 312 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 BTBD7Q9P203 1132 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 SLC4A7Q9Y6M7 1214 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 LOC100653049A0A140TA62 436 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 KRT34O76011 436 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 RAG1P15918 1043 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 ITGAXP20702 1163 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 SERPINB6P35237 376 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 RGS7P49802 495 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 GBE1Q04446 702 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 TMEM132AQ24JP5 1023 aa19.02■□□□□ 0.64
HPS3-204ENST00000462030 ATF7IP2Q5U623 682 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms