RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SUFUQ9UMX1 484 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 VPS4AQ9UN37 437 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 ZBTB1Q9Y2K1 713 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 TMEM98Q9Y2Y6 226 aa3.56□□□□□ -1.84
VCL-203ENST00000461383 POLR2AP24928 1970 aaKnown RBP3.56□□□□□ -1.84
VCL-203ENST00000461383 CENPVL1A0A0U1RR11 272 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SLC38A8A6NNN8 435 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 TISP43B9A030 160 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 QSOX1O00391 747 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 MPPED1O15442 326 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 DHHO43323 396 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 HNRNPRO43390 633 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 ANP32CO43423 234 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PROM1O43490 865 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SPRY2O43597 315 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 AKAP8O43823 692 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 CBFA2T3O75081 653 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 TTLL1O95922 423 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SLC3A2P08195 630 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 NPSP0C0P6 89 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 ENGP17813 658 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 CXCR5P32302 372 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 CYP2C18P33260 490 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 IGHMBP2P38935 993 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 FOLR3P41439 243 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 LIFRP42702 1097 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 CDK7P50613 346 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SEC24CP53992 1094 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 RBM6P78332 1123 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 CHRNDQ07001 517 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 CCDC15Q0P6D6 951 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 MTAPQ13126 283 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 TUBA3CQ13748 450 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 KCNJ12Q14500 433 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PTPRRQ15256 657 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PTPAQ15257 358 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 AAK1Q2M2I8 961 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 NBPF8Q3BBV2 869 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 TBC1D25Q3MII6 688 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 AASDHQ4L235 1098 aaPredicted RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 L1TD1Q5T7N2 865 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 MAP3K21Q5TCX8 1036 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 GRHL2Q6ISB3 625 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 WDR93Q6P2C0 686 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 TUBA3EQ6PEY2 450 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 RNF207Q6ZRF8 634 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PTCHD4Q6ZW05 846 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 ANKS1BQ7Z6G8 1248 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SLC44A3Q8N4M1 653 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.55□□□□□ -1.84
VCL-203ENST00000461383 USP38Q8NB14 1042 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PCYOX1LQ8NBM8 494 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 ABHD11Q8NFV4 315 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 HDAC2Q92769 488 aaKnown RBP3.55□□□□□ -1.84
VCL-203ENST00000461383 CAVIN3Q969G5 261 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 TWNKQ96RR1 684 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PIGSQ96S52 555 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PAAF1Q9BRP4 392 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 WDR11Q9BZH6 1224 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 GPR63Q9BZJ6 419 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 JMJD4Q9H9V9 463 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SLC2A4RGQ9NR83 387 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 LRIT1Q9P2V4 623 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PI4KBQ9UBF8 816 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 AMFRQ9UKV5 643 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 SLC12A4Q9UP95 1085 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 DNAJC16Q9Y2G8 782 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 PCDHA10Q9Y5I2 948 aa3.55□□□□□ -1.84
VCL-203ENST00000461383 GXYLT2A0PJZ3 443 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 PIPSLA2A3N6 862 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 AGAP5A6NIR3 686 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 SAC3D1A6NKF1 404 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 M0QYT0 321 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 PEX12O00623 359 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 KLK10O43240 276 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 URI1O94763 535 aaPredicted RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 PEX11BO96011 259 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 CD4P01730 458 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 ALDOAP04075 364 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 CNPP09543 421 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 HNRNPA1P09651 372 aaKnown RBP eCLIP3.54□□□□□ -1.84
VCL-203ENST00000461383 C1SP09871 688 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 EBLN1P0CF75 366 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 TMIGD3P0DMS9 266 aaPredicted RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 ATP1A3P13637 1013 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 ZFP36P26651 326 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 MAN1A1P33908 653 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 PGM1P36871 562 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 TUBP50607 506 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 RCAN1P53805 252 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 BLOC1S1P78537 153 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 ZXDAP98168 799 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 MPP1Q00013 466 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 DEUP1Q05D60 604 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 GOLGA8FQ08AF8 430 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 SIM2Q14190 667 aaPredicted RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 R3HDM1Q15032 1099 aaKnown RBP3.54□□□□□ -1.84
VCL-203ENST00000461383 CYP1B1Q16678 543 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 TXNRD1Q16881 649 aa3.54□□□□□ -1.84
VCL-203ENST00000461383 ZNF484Q5JVG2 852 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms