RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 SELENOOQ9BVL4 669 aa14.39□□□□□ -0.11
CHRD-209ENST00000461120 KLF16Q9BXK1 252 aaPredicted RBP14.39□□□□□ -0.11
CHRD-209ENST00000461120 SMOC2Q9H3U7 446 aa14.39□□□□□ -0.11
CHRD-209ENST00000461120 OBP2AQ9NY56 170 aa14.39□□□□□ -0.11
CHRD-209ENST00000461120 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHRD-209ENST00000461120 MARCH2Q9P0N8 246 aa14.39□□□□□ -0.11
CHRD-209ENST00000461120 NUMBLQ9Y6R0 609 aa14.39□□□□□ -0.11
CHRD-209ENST00000461120 HELZP42694 1942 aaKnown RBP14.39□□□□□ -0.11
CHRD-209ENST00000461120 GCN1Q92616 2671 aaKnown RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 ANKRD62A6NC57 917 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 HEPACAM2A8MVW5 462 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 EIF3CLB5ME19 914 aaKnown RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 LEFTY2O00292 366 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 DPYSL4O14531 572 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 LCA5LO95447 670 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 H2AFZP0C0S5 128 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 KRT3P12035 628 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 TCF3P15923 654 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 ABCB4P21439 1286 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 NOS2P35228 1153 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 MATKP42679 507 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 PITX1P78337 314 aaPredicted RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 USP4Q13107 963 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 MAMLD1Q13495 774 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 MTF1Q14872 753 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 ZNF77Q15935 545 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 TRNP1Q6NT89 227 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 H2AFVQ71UI9 128 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 TAC4Q86UU9 113 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 MIB1Q86YT6 1006 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 EMC1Q8N766 993 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 RIN3Q8TB24 985 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 SH3RF2Q8TEC5 729 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 NXPE3Q969Y0 559 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 E2F7Q96AV8 911 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 ELSPBP1Q96BH3 223 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 LRRC3BQ96PB8 259 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 EIF3CQ99613 913 aaKnown RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 KXD1Q9BQD3 176 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 RPP25Q9BUL9 199 aaKnown RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 DDX23Q9BUQ8 820 aaKnown RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 PACSIN1Q9BY11 444 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 PLA2G2FQ9BZM2 168 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 THAP2Q9H0W7 228 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 PARVAQ9NVD7 372 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 SFMBT1Q9UHJ3 866 aa14.38□□□□□ -0.11
CHRD-209ENST00000461120 EPN1Q9Y6I3 576 aaPredicted RBP14.38□□□□□ -0.11
CHRD-209ENST00000461120 SLC12A8A0AV02 714 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
CHRD-209ENST00000461120 NDUFA10O95299 355 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 TRUB2O95900 331 aaKnown RBP14.37□□□□□ -0.11
CHRD-209ENST00000461120 IGLV3-25P01717 112 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 CYP1A2P05177 515 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 RFC1P35251 1148 aaPredicted RBP14.37□□□□□ -0.11
CHRD-209ENST00000461120 GPC5P78333 572 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 COG7P83436 770 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 C10orf76Q5T2E6 689 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 VITQ6UXI7 678 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHRD-209ENST00000461120 LRRC8AQ8IWT6 810 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 ADAM32Q8TC27 787 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 BPIFB1Q8TDL5 484 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 RXFP2Q8WXD0 754 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 RSAD2Q8WXG1 361 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 WBP2Q969T9 261 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 ARHGEF26Q96DR7 871 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 MCEEQ96PE7 176 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 NPY6RQ99463 290 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 KCNK12Q9HB15 430 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 RRN3Q9NYV6 651 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 CFAP97Q9P2B7 532 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 IGSF9Q9P2J2 1179 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 MYO1AQ9UBC5 1043 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 HBS1LQ9Y450 684 aaKnown RBP14.37□□□□□ -0.11
CHRD-209ENST00000461120 SCINQ9Y6U3 715 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 ZFYVE26Q68DK2 2539 aa14.37□□□□□ -0.11
CHRD-209ENST00000461120 C2CD4BA6NLJ0 364 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 STC2O76061 302 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 ASGR2P07307 311 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 HMBSP08397 361 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 TMEM253P0C7T8 217 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 IRF1P10914 325 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 TFE3P19532 575 aaPredicted RBP14.36□□□□□ -0.11
CHRD-209ENST00000461120 MAGEA1P43355 309 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
CHRD-209ENST00000461120 ANGPT1Q15389 498 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 SPA17Q15506 151 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 TRIP4Q15650 581 aaPredicted RBP14.36□□□□□ -0.11
CHRD-209ENST00000461120 OTUD1Q5VV17 481 aaPredicted RBP14.36□□□□□ -0.11
CHRD-209ENST00000461120 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 MFSD6LQ8IWD5 586 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 DEPDC1BQ8WUY9 529 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 CTNNBL1Q8WYA6 563 aaPredicted RBP14.36□□□□□ -0.11
CHRD-209ENST00000461120 NT5C3BQ969T7 300 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 SERPINB11Q96P15 392 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
CHRD-209ENST00000461120 MRPL47Q9HD33 250 aaKnown RBP14.36□□□□□ -0.11
CHRD-209ENST00000461120 INTUQ9ULD6 942 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms