RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 NUP93Q8N1F7 819 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 OTUB2Q96DC9 234 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 INTS2Q9H0H0 1204 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 FAM49BQ9NUQ9 324 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 ANO10Q9NW15 660 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 KIAA1522Q9P206 1035 aaPredicted RBP14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 SUSD2Q9UGT4 822 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 USP3Q9Y6I4 520 aa14.37□□□□□ -0.11
SCAMP4-206ENST00000460767 IGHV1OR15-9A0A0B4J2B8 117 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 LRRC10BA6NIK2 292 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 ZNF217O75362 1048 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 AP1G2O75843 785 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 OAS1P00973 400 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 PRKCSHP14314 528 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 GABRG2P18507 467 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 EEF1GP26641 437 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 PON1P27169 355 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 SLC5A3P53794 718 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 CETN1Q12798 172 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 STX1AQ16623 288 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 PREPLQ4J6C6 727 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 TCP11X2Q5H9J9 407 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 RAB41Q5JT25 222 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 RHBDF2Q6PJF5 856 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 GPRIN1Q7Z2K8 1008 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 C12orf40Q86WS4 652 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 TTC30AQ86WT1 665 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 NAXDQ8IW45 347 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 SFTPA1Q8IWL2 248 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 SCAMP5Q8TAC9 235 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 OVCA2Q8WZ82 227 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 BBC3Q96PG8 261 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 DUSP16Q9BY84 665 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 UBXN6Q9BZV1 441 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 ZDHHC5Q9C0B5 715 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 NDST4Q9H3R1 872 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 ARHGEF4Q9NR80 690 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 TRPM5Q9NZQ8 1165 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 TBC1D14Q9P2M4 693 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 APOBEC2Q9Y235 224 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 FREM2Q5SZK8 3169 aa14.36□□□□□ -0.11
SCAMP4-206ENST00000460767 O00370 1275 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 HOXC11O43248 304 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 CBFA2T3O75081 653 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 DKK1O94907 266 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 RTN3O95197 1032 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 PAEPP09466 180 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 FAM200BP0CF97 657 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 ADH5P11766 374 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 SLC9A1P19634 815 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 ANXA13P27216 316 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 SLC6A11P48066 632 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 PGFP49763 221 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 YWHAEP62258 255 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 TYRO3Q06418 890 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 KCNMA1Q12791 1236 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 LRMPQ12912 555 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 TAF10Q12962 218 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 VWA3BQ502W6 1294 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 SLC41A1Q8IVJ1 513 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 FAM114A1Q8IWE2 563 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 ZNF276Q8N554 614 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 ANKRD52Q8NB46 1076 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 TFAP2BQ92481 460 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 ZNF419Q96HQ0 510 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 BPIFA3Q9BQP9 254 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 TUBGCP2Q9BSJ2 902 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 FSCN3Q9NQT6 498 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 APEX2Q9UBZ4 518 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 KIAA1257Q9ULG3 409 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 STARD13Q9Y3M8 1113 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 NBEAQ8NFP9 2946 aa14.35□□□□□ -0.11
SCAMP4-206ENST00000460767 E2F8A0AVK6 867 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 BECN2A8MW95 431 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 KCNJ18B7U540 433 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 SH3BP5O60239 455 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 ZNF883P0CG24 379 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 TUBP50607 506 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 KIF11P52732 1056 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 MAP3K7CLP57077 242 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 APBA1Q02410 837 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 GAD2Q05329 585 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 KCNJ12Q14500 433 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 EXOC3L4Q17RC7 722 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 ZNF394Q53GI3 561 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 EMC10Q5UCC4 262 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 GBP6Q6ZN66 633 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 RRAGAQ7L523 313 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 ENOSF1Q7L5Y1 443 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 BHLHA9Q7RTU4 235 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 PPM1KQ8N3J5 372 aa14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 ZNF513Q8N8E2 541 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-206ENST00000460767 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms