RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 PRAMEF2O60811 474 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 C1QL1O75973 258 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 ALADP13716 330 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 VEGFAP15692 232 aaPredicted RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 WT1P19544 449 aaPredicted RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 GPD1P21695 349 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 AKT1P31749 480 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 HALP42357 657 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 COPB1P53618 953 aaKnown RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 DNASE1L3Q13609 305 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 P3H1Q32P28 736 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 ALFQ53S48 1182 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 CCDC144NLQ6NUI1 221 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 RINT1Q6NUQ1 792 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 MSANTD2Q6P1R3 559 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 CEP85Q6P2H3 762 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 CASC1Q6TDU7 716 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 ZNF804AQ7Z570 1209 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 TTC30AQ86WT1 665 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 SFTPA1Q8IWL2 248 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 CLASRPQ8N2M8 674 aaKnown RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 NKAPQ8N5F7 415 aaKnown RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.84□□□□□ -1.79
VPS8-215ENST00000460158 PNPLA1Q8N8W4 532 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 TERB1Q8NA31 727 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 STT3BQ8TCJ2 826 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 REPS1Q96D71 796 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 MCRS1Q96EZ8 462 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 MMS19Q96T76 1030 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 SORBS1Q9BX66 1292 aaKnown RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 TP63Q9H3D4 680 aaPredicted RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 SNX15Q9NRS6 342 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 VPS45Q9NRW7 570 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 SEMA4GQ9NTN9 838 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 SH3BP4Q9P0V3 963 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 ZNHIT2Q9UHR6 403 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 INSL6Q9Y581 213 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 PCDHB2Q9Y5E7 798 aa3.84□□□□□ -1.79
VPS8-215ENST00000460158 MORC2Q9Y6X9 1032 aaPredicted RBP3.84□□□□□ -1.79
VPS8-215ENST00000460158 LRRC3CA6NJW4 275 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 TARM1B6A8C7 271 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 M0QZQ0 153 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 CTIFO43310 598 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 RPP40O75818 363 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 CER1O95813 267 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 APEHP13798 732 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 ZNF37AP17032 561 aaPredicted RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 GRK6P43250 576 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 GSTM5P46439 218 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 RENBPP51606 427 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 DGKQP52824 942 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 TERF1P54274 439 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 PNLIPRP1P54315 467 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 SOX10P56693 466 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 GPC5P78333 572 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 TXNL4AP83876 142 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 HOXA4Q00056 320 aaPredicted RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 FOXO1Q12778 655 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 SEMA3BQ13214 749 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 CSHL1Q14406 222 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 CCDC142Q17RM4 750 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 SLC4A8Q2Y0W8 1093 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 BTBD16Q32M84 506 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 LRCH2Q5VUJ6 765 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 DENND2CQ68D51 928 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 SULT6B1Q6IMI4 303 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 JMJD6Q6NYC1 403 aaPredicted RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 BCDIN3DQ7Z5W3 292 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 NRSN1Q8IZ57 195 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 CPXCR1Q8N123 301 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 C12orf76Q8N812 135 aaPredicted RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 FAM71DQ8N9W8 422 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 FAM98AQ8NCA5 519 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 NGDNQ8NEJ9 315 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 SLC22A17Q8WUG5 538 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 CCT6BQ92526 530 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 SARAFQ96BY9 339 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 LTV1Q96GA3 475 aaPredicted RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 SNX18Q96RF0 628 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 HERPUD2Q9BSE4 406 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 MLXIPQ9HAP2 919 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 USP29Q9HBJ7 922 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 AGO4Q9HCK5 861 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 ASIC5Q9NY37 505 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 ARPP21Q9UBL0 812 aaPredicted RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 ZNF69Q9UC07 566 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 SERGEFQ9UGK8 458 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 HERC5Q9UII4 1024 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 NOL7Q9UMY1 257 aaKnown RBP3.83□□□□□ -1.8
VPS8-215ENST00000460158 VPS4AQ9UN37 437 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 PCDHB7Q9Y5E2 793 aa3.83□□□□□ -1.8
VPS8-215ENST00000460158 CCDC187A0A096LP49 1063 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 BICDL2A1A5D9 508 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 IPO5O00410 1097 aaKnown RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 DHX16O60231 1041 aaKnown RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 JTBO76095 146 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 ACTL6BO94805 426 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 NUDT3O95989 172 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 IGLV2-14P01704 120 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms