RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 DCDC5Q6ZRR9 648 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 PNLDC1Q8NA58 520 aaKnown RBP7.16□□□□□ -1.26
CKAP2-204ENST00000459902 STT3BQ8TCJ2 826 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 RSC1A1Q92681 617 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 NELL1Q92832 810 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 SORBS1Q9BX66 1292 aaKnown RBP7.16□□□□□ -1.26
CKAP2-204ENST00000459902 KRTAP4-2Q9BYR5 136 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 SEMA5BQ9P283 1151 aa7.16□□□□□ -1.26
CKAP2-204ENST00000459902 ARHGEF17Q96PE2 2063 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-204ENST00000459902 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.15□□□□□ -1.26
CKAP2-204ENST00000459902 RPP40O75818 363 aaKnown RBP7.15□□□□□ -1.26
CKAP2-204ENST00000459902 C1RP00736 705 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 JAK3P52333 1124 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 PNLIPRP1P54315 467 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 LARS2Q15031 903 aaKnown RBP7.15□□□□□ -1.26
CKAP2-204ENST00000459902 C4orf46Q504U0 113 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 AWAT1Q58HT5 328 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 C16orf89Q6UX73 402 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 TRABD2AQ86V40 505 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 PSMD1Q99460 953 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 RTKNQ9BST9 563 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 PPCSQ9HAB8 311 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 MLXIPQ9HAP2 919 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 ABHD10Q9NUJ1 306 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 FBXO28Q9NVF7 368 aa7.15□□□□□ -1.26
CKAP2-204ENST00000459902 FAM90A18PA6NE21 464 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 FAM90A16PA6NEW6 464 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 MANSC4A6NHS7 340 aaPredicted RBP7.14□□□□□ -1.27
CKAP2-204ENST00000459902 FAM90A9PA6NNJ1 464 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 FAM90A5PA8MXJ8 464 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 UBE2Q2LH0YL09 131 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 ACTL6BO94805 426 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 FAM90A15PP0C7V4 464 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 FAM90A14PP0C7W9 464 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 VEGFAP15692 232 aaPredicted RBP7.14□□□□□ -1.27
CKAP2-204ENST00000459902 DUSP1P28562 367 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 POLE2P56282 527 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 KCNB1Q14721 858 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 BTBD16Q32M84 506 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 TRIM60Q495X7 471 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 TANGO2Q6ICL3 276 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 KLHL17Q6TDP4 642 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 DNAJC10Q8IXB1 793 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 NKAPQ8N5F7 415 aaKnown RBP7.14□□□□□ -1.27
CKAP2-204ENST00000459902 SEMA6DQ8NFY4 1073 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 OR52L2PQ8NGH6 319 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 SCAMP5Q8TAC9 235 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 MORC4Q8TE76 937 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 HASPINQ8TF76 798 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 NPIPB3Q92617 1050 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 ASB2Q96Q27 587 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 ADGRE3Q9BY15 652 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 PABPC3Q9H361 631 aaKnown RBP7.14□□□□□ -1.27
CKAP2-204ENST00000459902 AGO4Q9HCK5 861 aaKnown RBP7.14□□□□□ -1.27
CKAP2-204ENST00000459902 KCNK9Q9NPC2 374 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 RIPOR2Q9Y4F9 1068 aa7.14□□□□□ -1.27
CKAP2-204ENST00000459902 LOC105369274A0A096LPK9 316 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 LOC102723532A0A0G2JNH3 316 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 KIF28PB7ZC32 967 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 PRRT4C9JH25 899 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 M0QYT0 321 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 CHRM5P08912 532 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 CYP2D6P10635 497 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 GRK6P43250 576 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 NANOS3P60323 173 aaKnown RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 WDR5P61964 334 aaKnown RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 TUBA4AP68366 448 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 GAB1Q13480 694 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 ATPAF1Q5TC12 328 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 ANO1Q5XXA6 986 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 JMJD6Q6NYC1 403 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 ZNF782Q6ZMW2 699 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 SLC44A2Q8IWA5 706 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 CCDC117Q8IWD4 279 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 OR4N4Q8N0Y3 316 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 OTUD7AQ8TE49 926 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 GLMPQ8WWB7 406 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 LTV1Q96GA3 475 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 CDCP1Q9H5V8 836 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 PRDM8Q9NQV8 689 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 CNTN6Q9UQ52 1028 aa7.13□□□□□ -1.27
CKAP2-204ENST00000459902 UBE2J1Q9Y385 318 aaPredicted RBP7.13□□□□□ -1.27
CKAP2-204ENST00000459902 SPATA31A1Q5TZJ5 1347 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 WIPF3A6NGB9 483 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 PIP5K1CO60331 668 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 PPP6R2O75170 966 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 MATN1P21941 496 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 HALP42357 657 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 AP2B1P63010 937 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 SLC14A1Q13336 389 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 VSTM1Q6UX27 236 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 KYAT3Q6YP21 454 aaKnown RBP7.12□□□□□ -1.27
CKAP2-204ENST00000459902 NTN5Q8WTR8 489 aaPredicted RBP7.12□□□□□ -1.27
CKAP2-204ENST00000459902 CCT6BQ92526 530 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 DPF1Q92782 380 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 MECRQ9BV79 373 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 VPS16Q9H269 839 aa7.12□□□□□ -1.27
CKAP2-204ENST00000459902 NFU1Q9UMS0 254 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms