RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TXNP10599 105 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 RARBP10826 455 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TM4SF4P48230 202 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 AQP5P55064 265 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 ZNF844Q08AG5 666 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 NR1D2Q14995 579 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PDK1Q15118 436 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 FAM98BQ52LJ0 330 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 KLHDC7AQ5VTJ3 777 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 SDE2Q6IQ49 451 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TUBA3EQ6PEY2 450 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TRIM65Q6PJ69 517 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PID1Q7Z2X4 250 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 NLRP4Q96MN2 994 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TAAR1Q96RJ0 339 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 VTA1Q9NP79 307 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 GPR25O00155 361 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 CD3EAPO15446 510 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 SASH3O75995 380 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 RRM2P31350 389 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 CDK7P50613 346 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 COX10Q12887 443 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TRAP1Q12931 704 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 CCDC157Q569K6 752 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 KCNT1Q5JUK3 1230 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 AGAP9Q5VTM2 703 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TMC3Q7Z5M5 1100 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 LRRC49Q8IUZ0 686 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 CCDC36Q8IYA8 594 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TSPAN14Q8NG11 270 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PTPRN2Q92932 1015 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 REXO4Q9GZR2 422 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 THAP1Q9NVV9 213 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 ING4Q9UNL4 249 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 EIF3LQ9Y262 564 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 WDR90Q96KV7 1748 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 ADCY6O43306 1168 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 SNX3O60493 162 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 BAIAP3O94812 1187 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PGK2P07205 417 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 TSHRP16473 764 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 HSD17B4P51659 736 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 MAPRE1Q15691 268 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 SAMD4BQ5PRF9 694 aaKnown RBP10.03□□□□□ -0.8
UFD1-205ENST00000459854 SIAH1Q8IUQ4 282 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 C7orf31Q8N865 590 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 KBTBD8Q8NFY9 601 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 GPRASP2Q96D09 838 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PHACTR1Q9C0D0 580 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 GANQ9H2C0 597 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 PNPLA3Q9NST1 481 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 SHOC2Q9UQ13 582 aa10.03□□□□□ -0.8
UFD1-205ENST00000459854 FCHO1O14526 889 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 RIPK2O43353 540 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 LDLRP01130 860 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 GH1P01241 217 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 GZMAP12544 262 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 RAG1P15918 1043 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 PTDSS1P48651 473 aaKnown RBP10.02□□□□□ -0.8
UFD1-205ENST00000459854 SPIRE1Q08AE8 756 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 ITGADQ13349 1161 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 CCNG2Q16589 344 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 SUN5Q8TC36 379 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 C18orf8Q96DM3 657 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 COX4I2Q96KJ9 171 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 CELF4Q9BZC1 486 aaKnown RBP10.02□□□□□ -0.8
UFD1-205ENST00000459854 UBXN6Q9BZV1 441 aa10.02□□□□□ -0.8
UFD1-205ENST00000459854 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.8
UFD1-205ENST00000459854 M0QYV0 167 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 FOXN1O15353 648 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 SNAP91O60641 907 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 VPS4BO75351 444 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 CTDNEP1O95476 244 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 APRTP07741 180 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 BLMHQ13867 455 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 PDK3Q15120 406 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 DDR2Q16832 855 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 TBCELQ5QJ74 424 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 MFSD4BQ5TF39 518 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 BROXQ5VW32 411 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 CENPLQ8N0S6 344 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 UGT2B28Q9BY64 529 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 SERHL2Q9H4I8 314 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 GPAMQ9HCL2 828 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 SERHLQ9NQF3 203 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 RNF186Q9NXI6 227 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 MORF4L1Q9UBU8 362 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 BAZ2AQ9UIF9 1905 aaKnown RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 NKRFO15226 690 aaKnown RBP eCLIP10.02□□□□□ -0.81
UFD1-205ENST00000459854 SOAT2O75908 522 aa10.02□□□□□ -0.81
UFD1-205ENST00000459854 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
UFD1-205ENST00000459854 CASP1P29466 404 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms