RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CSPG4P5Q96PW8 444 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 WDCPQ9H6R7 721 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 RXFP1Q9HBX9 757 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 OSER1Q9NX31 292 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 NFU1Q9UMS0 254 aa25.35■■□□□ 1.65
U2AF1-204ENST00000459639 H3BRJ5 948 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 DAPK3O43293 454 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 SEC24AO95486 1093 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 ITGAVP06756 1048 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 ZFXP17010 805 aaPredicted RBP25.34■■□□□ 1.65
U2AF1-204ENST00000459639 TAF10Q12962 218 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 TRADDQ15628 312 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 BRMS1LQ5PSV4 323 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 RASIP1Q5U651 963 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 PYROXD2Q8N2H3 581 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 KLHL23Q8NBE8 558 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 SERPINB11Q96P15 392 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 DPH5Q9H2P9 285 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 ZNF446Q9NWS9 450 aa25.34■■□□□ 1.65
U2AF1-204ENST00000459639 CWC15Q9P013 229 aaKnown RBP25.34■■□□□ 1.65
U2AF1-204ENST00000459639 PECAM1P16284 738 aaPredicted RBP25.33■■□□□ 1.65
U2AF1-204ENST00000459639 MTMR3Q13615 1198 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 NOMO1Q15155 1222 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 EMBQ6PCB8 327 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 PLD5Q8N7P1 536 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 GIPC2Q8TF65 315 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 AUTS2Q8WXX7 1259 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 CASP10Q92851 521 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 MAGEB5Q9BZ81 275 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 TMPRSS4Q9NRS4 437 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 OLA1Q9NTK5 396 aaKnown RBP25.33■■□□□ 1.65
U2AF1-204ENST00000459639 ZNF148Q9UQR1 794 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 NEU2Q9Y3R4 380 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 YIPF1Q9Y548 306 aa25.33■■□□□ 1.65
U2AF1-204ENST00000459639 ZNF135P52742 658 aaPredicted RBP25.32■■□□□ 1.64
U2AF1-204ENST00000459639 HLTFQ14527 1009 aaKnown RBP eCLIP25.32■■□□□ 1.64
U2AF1-204ENST00000459639 DDX42Q86XP3 938 aaKnown RBP eCLIP25.32■■□□□ 1.64
U2AF1-204ENST00000459639 P3H4Q92791 437 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 TRIM31Q9BZY9 425 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 TKTL2Q9H0I9 626 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 CYP4F11Q9HBI6 524 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 ANLNQ9NQW6 1124 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 SAE1Q9UBE0 346 aaPredicted RBP25.32■■□□□ 1.64
U2AF1-204ENST00000459639 RWDD3Q9Y3V2 267 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 MCF2LO15068 1137 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 ZDHHC11BP0C7U3 371 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 GOT1P17174 413 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 ECHS1P30084 290 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 SEMA3BQ13214 749 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 ALLCQ8N6M5 410 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 OVCA2Q8WZ82 227 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 RNF34Q969K3 372 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.32■■□□□ 1.64
U2AF1-204ENST00000459639 ARHGEF38Q9NXL2 777 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 LZTS1Q9Y250 596 aa25.32■■□□□ 1.64
U2AF1-204ENST00000459639 LCHNA4D1U4 455 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 I6L893 689 aaPredicted RBP25.31■■□□□ 1.64
U2AF1-204ENST00000459639 CSH1P0DML2 217 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 CSH2P0DML3 217 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 PPP2R5DQ14738 602 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 TCEAL8Q8IYN2 117 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 PDZD8Q8NEN9 1154 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 CCHCR1Q8TD31 782 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 UBE2OQ9C0C9 1292 aaKnown RBP25.31■■□□□ 1.64
U2AF1-204ENST00000459639 SFMBT1Q9UHJ3 866 aa25.31■■□□□ 1.64
U2AF1-204ENST00000459639 EEF2KO00418 725 aaKnown RBP25.3■■□□□ 1.64
U2AF1-204ENST00000459639 TEX28O15482 410 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 ATP8B1O43520 1251 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 RARGP13631 454 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 CCR1P32246 355 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 BMPR1AP36894 532 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 RPL21P46778 160 aaKnown RBP25.3■■□□□ 1.64
U2AF1-204ENST00000459639 ALDH1A3P47895 512 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 EIF3EP60228 445 aaKnown RBP25.3■■□□□ 1.64
U2AF1-204ENST00000459639 NNTQ13423 1086 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 GSTA5Q7RTV2 222 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 MTERF4Q7Z6M4 381 aaKnown RBP25.3■■□□□ 1.64
U2AF1-204ENST00000459639 CCDC89Q8N998 374 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 CAVIN3Q969G5 261 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 FAM129AQ9BZQ8 928 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 ASIC3Q9UHC3 531 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 SNX24Q9Y343 169 aa25.3■■□□□ 1.64
U2AF1-204ENST00000459639 ELF1P32519 619 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 CTNNB1P35222 781 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 HCAR3P49019 387 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 KCTD19Q17RG1 926 aaPredicted RBP25.29■■□□□ 1.64
U2AF1-204ENST00000459639 C1orf228Q6PIY5 440 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 NPNTQ6UXI9 565 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 DPF3Q92784 378 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 ARHGEF4Q9NR80 690 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 MAGED2Q9UNF1 606 aaPredicted RBP25.29■■□□□ 1.64
U2AF1-204ENST00000459639 TLR6Q9Y2C9 796 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 PRRG1O14668 218 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 MSI1O43347 362 aaKnown RBP25.29■■□□□ 1.64
U2AF1-204ENST00000459639 CREB3O43889 395 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 KRT14P02533 472 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 NR2C2P49116 596 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 VEPH1Q14D04 833 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 RFX8Q6ZV50 586 aa25.29■■□□□ 1.64
U2AF1-204ENST00000459639 MYRFLQ96LU7 910 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms