RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MPPE1Q53F39 396 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 GRAMD4Q6IC98 578 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 SLC26A9Q7LBE3 791 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 ZNF397Q8NF99 534 aaPredicted RBP16.83■□□□□ 0.28
CD28-203ENST00000458610 KCNV2Q8TDN2 545 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 ACDQ96AP0 544 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 IQCDQ96DY2 449 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 STOML2Q9UJZ1 356 aa16.83■□□□□ 0.28
CD28-203ENST00000458610 TBC1D3BA6NDS4 549 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 CACNG3O60359 315 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 RNF40O75150 1001 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 TULP3O75386 442 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 APOEP02649 317 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 ERBB2P04626 1255 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 SP9P0CG40 484 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 SLC6A11P48066 632 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 MRPS21P82921 87 aaKnown RBP16.82■□□□□ 0.28
CD28-203ENST00000458610 ARID5AQ03989 594 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 GAB4Q2WGN9 574 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 HSF5Q4G112 596 aaPredicted RBP16.82■□□□□ 0.28
CD28-203ENST00000458610 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 DCAF6Q58WW2 860 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 SYPL2Q5VXT5 272 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 PPP1R2P3Q6NXS1 205 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 FAM183BPQ6ZVS7 135 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 ETFBKMTQ8IXQ9 262 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 DEFB106AQ8N104 65 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 NAT16Q8N8M0 369 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 TMA16Q96EY4 203 aaKnown RBP16.82■□□□□ 0.28
CD28-203ENST00000458610 SLC2A11Q9BYW1 496 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 SEMA4AQ9H3S1 761 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 PRMT8Q9NR22 394 aaPredicted RBP16.82■□□□□ 0.28
CD28-203ENST00000458610 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
CD28-203ENST00000458610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.82■□□□□ 0.28
CD28-203ENST00000458610 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
CD28-203ENST00000458610 IRAK2O43187 625 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 MSI1O43347 362 aaKnown RBP16.81■□□□□ 0.28
CD28-203ENST00000458610 PAPSS2O95340 614 aaPredicted RBP16.81■□□□□ 0.28
CD28-203ENST00000458610 TRUB2O95900 331 aaKnown RBP16.81■□□□□ 0.28
CD28-203ENST00000458610 IGLV3-27P01718 113 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 CYP1A1P04798 512 aaPredicted RBP16.81■□□□□ 0.28
CD28-203ENST00000458610 NOS2P35228 1153 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 PLA2G5P39877 138 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 NOMO3P69849 1222 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 FIGNQ5HY92 759 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 NAA35Q5VZE5 725 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 OLFML1Q6UWY5 402 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 FAM217AQ8IXS0 508 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 ZNF557Q8N988 423 aaPredicted RBP16.81■□□□□ 0.28
CD28-203ENST00000458610 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 ATRIPQ8WXE1 791 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 CPA5Q8WXQ8 436 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 SLC2A13Q96QE2 648 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 AGPAT1Q99943 283 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 NUCKS1Q9H1E3 243 aaKnown RBP16.81■□□□□ 0.28
CD28-203ENST00000458610 FAM204AQ9H8W3 233 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 STAP1Q9ULZ2 295 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
CD28-203ENST00000458610 TYW5A2RUC4 315 aaKnown RBP16.8■□□□□ 0.28
CD28-203ENST00000458610 K7EQS6 105 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 CBFA2T2O43439 604 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 ACSL4O60488 711 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 DAB1O75553 588 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 F9P00740 461 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 PENKP01210 267 aaPredicted RBP16.8■□□□□ 0.28
CD28-203ENST00000458610 HOXA6P31267 233 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 MATKP42679 507 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 NSFP46459 744 aaKnown RBP16.8■□□□□ 0.28
CD28-203ENST00000458610 DGKGP49619 791 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 FMO1Q01740 532 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 TAF5Q15542 800 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 SFMBT2Q5VUG0 894 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 Q6ZS52 159 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 TRMT11Q7Z4G4 463 aaKnown RBP16.8■□□□□ 0.28
CD28-203ENST00000458610 MAML2Q8IZL2 1156 aaPredicted RBP16.8■□□□□ 0.28
CD28-203ENST00000458610 ATP6V0D2Q8N8Y2 350 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 SLC20A1Q8WUM9 679 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 RNF34Q969K3 372 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 SLC39A13Q96H72 371 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 SEPT11Q9NVA2 429 aaKnown RBP16.8■□□□□ 0.28
CD28-203ENST00000458610 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.8■□□□□ 0.28
CD28-203ENST00000458610 TJP2Q9UDY2 1190 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 PCDHGA2Q9Y5H1 932 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 COL4A3Q01955 1670 aa16.8■□□□□ 0.28
CD28-203ENST00000458610 GRAP2O75791 330 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 CALB1P05937 261 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 CHRNB2P17787 502 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 ABCB4P21439 1286 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 TNFAIP3P21580 790 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 MMP8P22894 467 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 CCR1P32246 355 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 NBL1P41271 181 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 KDSRQ06136 332 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 GAS6Q14393 721 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 ASIC2Q16515 512 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 MPP7Q5T2T1 576 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms