RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RHBGQ9H310 441 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 IGFLR1Q9H665 355 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ACADMP11310 421 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ACADSP16219 412 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 ATP6V1C1P21283 382 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 NFIAQ12857 509 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 TIGD7Q6NT04 549 aaPredicted RBP20.16■□□□□ 0.82
SNX27-204ENST00000458013 ADGRA1Q86SQ6 560 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 SYN2Q92777 582 aaPredicted RBP20.16■□□□□ 0.82
SNX27-204ENST00000458013 PPP2R3CQ969Q6 453 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 CCDC3Q9BQI4 270 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 SEMA4AQ9H3S1 761 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 GTF3C4Q9UKN8 822 aa20.16■□□□□ 0.82
SNX27-204ENST00000458013 USP42Q9H9J4 1324 aaKnown RBP20.16■□□□□ 0.82
SNX27-204ENST00000458013 F8VZ95 297 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 AMPD1P23109 780 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 NOS3P29474 1203 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 HSPA13P48723 471 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 BOLA3Q53S33 107 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 ARMCX4Q5H9R4 360 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 FNDC5Q8NAU1 212 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 PXMP2Q9NR77 195 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 CHKBQ9Y259 395 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 CDH8P55286 799 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 ZNF284Q2VY69 593 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 KBTBD12Q3ZCT8 623 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 FGD3Q5JSP0 725 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 SCUBE3Q8IX30 993 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 SYTL1Q8IYJ3 562 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 ELOVL6Q9H5J4 265 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 FCGRTP55899 365 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 LAMTOR4Q0VGL1 99 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 DNAJB3Q8WWF6 145 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 SLC5A5Q92911 643 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 APBA2Q99767 749 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 MID1IP1Q9NPA3 183 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 DDX20Q9UHI6 824 aaKnown RBP20.15■□□□□ 0.82
SNX27-204ENST00000458013 PTGES3LE9PB15 166 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 GPR182O15218 404 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 OGTO15294 1046 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 NUDT14O95848 222 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 NCF4Q15080 339 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 FUT8Q9BYC5 575 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 BCL2L14Q9BZR8 327 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 POLLQ9UGP5 575 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 SESN1Q9Y6P5 492 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 CALB2P22676 271 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 FBXO33Q7Z6M2 555 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 SPACA7Q96KW9 195 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 ABCG8Q9H221 673 aa20.15■□□□□ 0.82
SNX27-204ENST00000458013 AGO4Q9HCK5 861 aaKnown RBP20.15■□□□□ 0.82
SNX27-204ENST00000458013 INPP4BO15327 924 aa20.14■□□□□ 0.82
SNX27-204ENST00000458013 TP73O15350 636 aa20.14■□□□□ 0.82
SNX27-204ENST00000458013 NPNTQ6UXI9 565 aa20.14■□□□□ 0.82
SNX27-204ENST00000458013 WDR36Q8NI36 951 aaKnown RBP20.14■□□□□ 0.82
SNX27-204ENST00000458013 NDOR1Q9UHB4 597 aa20.14■□□□□ 0.82
SNX27-204ENST00000458013 CRYL1Q9Y2S2 319 aa20.14■□□□□ 0.82
SNX27-204ENST00000458013 IQCMA0A1B0GVH7 501 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 PIK3CDO00329 1044 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 UBDO15205 165 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 MSH3P20585 1137 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 SSTR1P30872 391 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNX27-204ENST00000458013 TMEM169Q96HH4 297 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 PPCSQ9HAB8 311 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 ATG7O95352 703 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 CRADDP78560 199 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 MPP3Q13368 585 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 BFSP2Q13515 415 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 ACOX1Q15067 660 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 ERMARDQ5T6L9 678 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 MTSS1LQ765P7 747 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 LPCAT2Q7L5N7 544 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 ACTR8Q9H981 624 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 H7C4K7 107 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 AP5Z1O43299 807 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 USP12O75317 370 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 AKAP3O75969 853 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 SEMA3FQ13275 785 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 C16orf72Q14CZ0 275 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 ABCA8O94911 1581 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 A0A1B0GW55 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 CCDC154A6NI56 674 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 TBC1D12O60347 775 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 BANF1O75531 89 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4L2P0CJ85 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4L3P0CJ86 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4L4P0CJ87 422 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4L5P0CJ88 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4L6P0CJ89 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4L7P0CJ90 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 STIP1P31948 543 aaKnown RBP20.14■□□□□ 0.81
SNX27-204ENST00000458013 ELK3P41970 407 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 C16orf46Q6P387 395 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 NOL6Q9H6R4 1146 aaKnown RBP20.14■□□□□ 0.81
SNX27-204ENST00000458013 DUX4Q9UBX2 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 PACSIN3Q9UKS6 424 aa20.14■□□□□ 0.81
SNX27-204ENST00000458013 TBKBP1A7MCY6 615 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms