RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 FAM71AQ8IYT1 594 aa18.53■□□□□ 0.56
COPS7A-202ENST00000455113 RPLP0P6Q8NHW5 317 aa18.53■□□□□ 0.56
COPS7A-202ENST00000455113 WBP2Q969T9 261 aa18.53■□□□□ 0.56
COPS7A-202ENST00000455113 ARHGEF4Q9NR80 690 aa18.53■□□□□ 0.56
COPS7A-202ENST00000455113 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
COPS7A-202ENST00000455113 DEC1Q9P2X7 70 aa18.53■□□□□ 0.56
COPS7A-202ENST00000455113 ATG2BQ96BY7 2078 aa18.53■□□□□ 0.56
COPS7A-202ENST00000455113 NEDD8-MDP1E9PL57 170 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 CAPN9O14815 690 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 HOXC11O43248 304 aaPredicted RBP18.52■□□□□ 0.56
COPS7A-202ENST00000455113 KAT7O95251 611 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 PAPSS2O95340 614 aaPredicted RBP18.52■□□□□ 0.56
COPS7A-202ENST00000455113 ASIC2Q16515 512 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 DENND1BQ6P3S1 775 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 IRF2BP2Q7Z5L9 587 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 TMEM25Q86YD3 366 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 FMNL3Q8IVF7 1028 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 SCUBE3Q8IX30 993 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 NAT16Q8N8M0 369 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 ACP6Q9NPH0 428 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 SFMBT1Q9UHJ3 866 aa18.52■□□□□ 0.56
COPS7A-202ENST00000455113 HBS1LQ9Y450 684 aaKnown RBP18.52■□□□□ 0.56
COPS7A-202ENST00000455113 CHURC1-FNTBB4DL54 471 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 GREM1O60565 184 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 LMNAP02545 664 aaKnown RBP18.52■□□□□ 0.55
COPS7A-202ENST00000455113 CYBBP04839 570 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 NCAM1P13591 858 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 FERP16591 822 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 GRIA2P42262 883 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 BHLHA9Q7RTU4 235 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 DENND1CQ8IV53 801 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 BAG1Q99933 345 aaPredicted RBP18.52■□□□□ 0.55
COPS7A-202ENST00000455113 PCDHGC3Q9UN70 934 aa18.52■□□□□ 0.55
COPS7A-202ENST00000455113 TBC1D3BA6NDS4 549 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 SKILP12757 684 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 TYRP14679 529 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 CLCN1P35523 988 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 SLC6A11P48066 632 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 SEC13P55735 322 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 KDSRQ06136 332 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 Q6ZNB5 142 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 TMEM139Q8IV31 216 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 ZBTB44Q8NCP5 570 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 CLEC4CQ8WTT0 213 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 ZNF830Q96NB3 372 aaPredicted RBP18.51■□□□□ 0.55
COPS7A-202ENST00000455113 SYNCQ9H7C4 482 aa18.51■□□□□ 0.55
COPS7A-202ENST00000455113 TULP3O75386 442 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 CCDC172P0C7W6 258 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 FECHP22830 423 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 RPL34P49207 117 aaKnown RBP18.5■□□□□ 0.55
COPS7A-202ENST00000455113 PDCLQ13371 301 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 GAB4Q2WGN9 574 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 C2orf27AQ580R0 203 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 HGSNATQ68CP4 663 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 SLC47A2Q86VL8 602 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 C12orf40Q86WS4 652 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 IPO4Q8TEX9 1081 aaKnown RBP18.5■□□□□ 0.55
COPS7A-202ENST00000455113 CHP1Q99653 195 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 SLC4A5Q9BY07 1137 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 LHX5Q9H2C1 402 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 KCNF1Q9H3M0 494 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 DNAJC17Q9NVM6 304 aaKnown RBP18.5■□□□□ 0.55
COPS7A-202ENST00000455113 MARK1Q9P0L2 795 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 AGO1Q9UL18 857 aaKnown RBP18.5■□□□□ 0.55
COPS7A-202ENST00000455113 FANCMQ8IYD8 2048 aa18.5■□□□□ 0.55
COPS7A-202ENST00000455113 PRR23AA6NEV1 266 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 E5RJQ4 531 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 SERPING1P05155 500 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 PRKCIP41743 596 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 TNFRSF4P43489 277 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 MRPS21P82921 87 aaKnown RBP18.49■□□□□ 0.55
COPS7A-202ENST00000455113 CDK17Q00537 523 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 KLHL30Q0D2K2 578 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 GRAMD4Q6IC98 578 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 SYT13Q7L8C5 426 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 TMEM110Q86TL2 294 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 LONP2Q86WA8 852 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 PASD1Q8IV76 773 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 UNC45BQ8IWX7 931 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 CAMKK1Q8N5S9 505 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 CCDC112Q8NEF3 446 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 NELL1Q92832 810 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 PPP1R13BQ96KQ4 1090 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 SERPINB11Q96P15 392 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 ARHGAP20Q9P2F6 1191 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 RAB23Q9ULC3 237 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 K7EQS6 105 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 CACNG3O60359 315 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 KLKB1P03952 638 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 PLEKP08567 350 aaPredicted RBP18.49■□□□□ 0.55
COPS7A-202ENST00000455113 CCZ1BP86790 482 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 CCZ1P86791 482 aaPredicted RBP18.49■□□□□ 0.55
COPS7A-202ENST00000455113 TRIP4Q15650 581 aaPredicted RBP18.49■□□□□ 0.55
COPS7A-202ENST00000455113 TDRD12Q587J7 1177 aaKnown RBP18.49■□□□□ 0.55
COPS7A-202ENST00000455113 NUGGCQ68CJ6 796 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 HEATR6Q6AI08 1181 aaKnown RBP18.49■□□□□ 0.55
COPS7A-202ENST00000455113 MSANTD2Q6P1R3 559 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 PKN3Q6P5Z2 889 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 ETFBKMTQ8IXQ9 262 aa18.49■□□□□ 0.55
COPS7A-202ENST00000455113 BHMTQ93088 406 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms