RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 GOLGA6L7A0A1B0GV03 622 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 KBTBD13C9JR72 458 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 CABYRO75952 493 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 MOCS2O96007 188 aaPredicted RBP14.14□□□□□ -0.15
CLK3-203ENST00000454830 IGHA2P01877 340 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 NUGGCQ68CJ6 796 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 LRRC34Q8IZ02 419 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 SCAMP5Q8TAC9 235 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 WDCPQ9H6R7 721 aa14.14□□□□□ -0.15
CLK3-203ENST00000454830 KCNK1O00180 336 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 MFSD11O43934 449 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 ZNF623O75123 536 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 TADA2AO75478 443 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 SKIP12755 728 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 SLC45A4Q5BKX6 768 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 SLC9A4Q6AI14 798 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 PPM1NQ8N819 430 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 ZMIZ2Q8NF64 920 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 RSPH1Q8WYR4 309 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 AGAP3Q96P47 875 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 USP29Q9HBJ7 922 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 DMAP1Q9NPF5 467 aaPredicted RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 ARHGEF4Q9NR80 690 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 DTLQ9NZJ0 730 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 FZD10Q9ULW2 581 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 TCP11X1B4DZS4 312 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 INHBAP08476 426 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 SLC39A12Q504Y0 691 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 PKNOX2Q96KN3 472 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 CNGB3Q9NQW8 809 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 TMLHEQ9NVH6 421 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 INTS6LQ5JSJ4 861 aaKnown RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 PID1Q7Z2X4 250 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 MRPL10Q7Z7H8 261 aaKnown RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 SH3TC2Q8TF17 1288 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 DEPDC1BQ8WUY9 529 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 THOC1Q96FV9 657 aaKnown RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 PAFAH2Q99487 392 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 NSRP1Q9H0G5 558 aaKnown RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 UBN1Q9NPG3 1134 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 MTMR10Q9NXD2 777 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 PSMC3IPQ9P2W1 217 aaPredicted RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 ZC3H7BQ9UGR2 993 aaKnown RBP14.13□□□□□ -0.15
CLK3-203ENST00000454830 LRFN2Q9ULH4 789 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
CLK3-203ENST00000454830 WDR91A4D1P6 747 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 H0YHG0 523 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 EPHB2P29323 1055 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 GEMIN4P57678 1058 aaKnown RBP14.12□□□□□ -0.15
CLK3-203ENST00000454830 SESN2P58004 480 aaPredicted RBP14.12□□□□□ -0.15
CLK3-203ENST00000454830 GPX6P59796 221 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 EMC10Q5UCC4 262 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 BTBD8Q5XKL5 378 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 FAM47EQ6ZV65 393 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 BZW1Q7L1Q6 419 aaKnown RBP14.12□□□□□ -0.15
CLK3-203ENST00000454830 SRLQ86TD4 932 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 OR10T2Q8NGX3 314 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 HTR3CQ8WXA8 447 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 CENPIQ92674 756 aaPredicted RBP14.12□□□□□ -0.15
CLK3-203ENST00000454830 NPY6RQ99463 290 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 TKTL2Q9H0I9 626 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 ABHD2P08910 425 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 LIG3P49916 1009 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 HHATQ5VTY9 493 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 NCBP2-AS2Q69YL0 99 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 SLC24A5Q71RS6 500 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 TADA2BQ86TJ2 420 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 KCTD13Q8WZ19 329 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 CLUHO75153 1309 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 A0A1W2PQ45 241 aaPredicted RBP14.12□□□□□ -0.15
CLK3-203ENST00000454830 A0A1W2PQY0 241 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 METTL18O95568 372 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 ADRA1BP35368 520 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 SCNN1AP37088 669 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 NOMO2Q5JPE7 1267 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 CCDC121Q6ZUS5 278 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 LRRTM3Q86VH5 581 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 IGDCC3Q8IVU1 814 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 ACBD6Q9BR61 282 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 PRDM12Q9H4Q4 367 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 HTTP42858 3142 aa14.12□□□□□ -0.15
CLK3-203ENST00000454830 A0A1W2PPM1 405 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 KLHL38Q2WGJ6 581 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 TP53INP2Q8IXH6 220 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 SEC16BQ96JE7 1060 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 B3GALT6Q96L58 329 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 DSEQ9UL01 958 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 TRIM17Q9Y577 477 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 BCLAF3A2AJT9 711 aaKnown RBP14.11□□□□□ -0.15
CLK3-203ENST00000454830 FAM72CH0Y354 149 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 TRIM66O15016 1216 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 PQBP1O60828 265 aaKnown RBP14.11□□□□□ -0.15
CLK3-203ENST00000454830 NEBLO76041 1014 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 TOMM70O94826 608 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 ERCC2P18074 760 aa14.11□□□□□ -0.15
CLK3-203ENST00000454830 NR2C2P49116 596 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms