RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RAB33AQ14088 237 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 PPP1R7Q15435 360 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 RAB30Q15771 203 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 HIBCHQ6NVY1 386 aaPredicted RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 ARCQ7LC44 396 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 UBL4BQ8N7F7 174 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 JOSD2Q8TAC2 188 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ZNF461Q8TAF7 563 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 IRGQQ8WZA9 623 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 FAM149B1Q96BN6 582 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 TGS1Q96RS0 853 aaKnown RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 C17orf80Q9BSJ5 609 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 TRIM62Q9BVG3 475 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 TRIM7Q9C029 511 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
SNX17-204ENST00000453453 PCYOX1Q9UHG3 505 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 MSRAQ9UJ68 235 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 MAFFQ9ULX9 164 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 ATP8A1Q9Y2Q0 1164 aa16.48■□□□□ 0.23
SNX17-204ENST00000453453 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
SNX17-204ENST00000453453 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.47■□□□□ 0.23
SNX17-204ENST00000453453 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
SNX17-204ENST00000453453 GRAP2O75791 330 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 WFS1O76024 890 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 CXCL14O95715 111 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 FGGP02679 453 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 MYOGP15173 224 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 PDGFRAP16234 1089 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 ATP5DP30049 168 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 SLC5A3P53794 718 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 DAOAP59103 153 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 DUSP4Q13115 394 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 ZKSCAN8Q15776 578 aaPredicted RBP16.47■□□□□ 0.23
SNX17-204ENST00000453453 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
SNX17-204ENST00000453453 GPRIN1Q7Z2K8 1008 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 SCML4Q8N228 414 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 EMC1Q8N766 993 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 NIPA2Q8N8Q9 360 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 CLEC4CQ8WTT0 213 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 AUTS2Q8WXX7 1259 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 CEP295NLQ96MC4 621 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 TCF25Q9BQ70 676 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 EMILIN2Q9BXX0 1053 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 DPH5Q9H2P9 285 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 FBXO44Q9H4M3 255 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 RXFP1Q9HBX9 757 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 NOP53Q9NZM5 478 aaKnown RBP16.47■□□□□ 0.23
SNX17-204ENST00000453453 USTQ9Y2C2 406 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 C15orf41Q9Y2V0 281 aa16.47■□□□□ 0.23
SNX17-204ENST00000453453 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNX17-204ENST00000453453 CEP290O15078 2479 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 DAB1O75553 588 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 RNF8O76064 485 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 ABLIM3O94929 683 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 USP17L7P0C7H9 530 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 SDC4P31431 198 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 SKIV2L2P42285 1042 aaKnown RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 SSR1P43307 286 aaKnown RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 ZNF143P52747 638 aaPredicted RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 SATB1Q01826 763 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 ACAP1Q15027 740 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 PTPROQ16827 1216 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 DDR2Q16832 855 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 JAMLQ86YT9 394 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 NUP93Q8N1F7 819 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 RXFP2Q8WXD0 754 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 PIWIL1Q96J94 861 aaKnown RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 SPATA17Q96L03 361 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 CNPY3Q9BT09 278 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 ALG13Q9NP73 1137 aaKnown RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 TLR9Q9NR96 1032 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 COMMD8Q9NX08 183 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 MTUS1Q9ULD2 1270 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.46■□□□□ 0.23
SNX17-204ENST00000453453 SLC27A5Q9Y2P5 690 aa16.46■□□□□ 0.23
SNX17-204ENST00000453453 C2CD4BA6NLJ0 364 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 PPP1R12AO14974 1030 aaPredicted RBP16.45■□□□□ 0.22
SNX17-204ENST00000453453 LILRB3O75022 631 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 ADH1AP07327 375 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 ATF2P15336 505 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 NQO1P15559 274 aaKnown RBP16.45■□□□□ 0.22
SNX17-204ENST00000453453 CCND1P24385 295 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 IFRD2Q12894 506 aaPredicted RBP16.45■□□□□ 0.22
SNX17-204ENST00000453453 GALNTL6Q49A17 601 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 ZDHHC24Q6UX98 284 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 LRRC34Q8IZ02 419 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 SPPL3Q8TCT6 385 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 POF1BQ8WVV4 589 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 SELENOSQ9BQE4 189 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 CYP4F11Q9HBI6 524 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 POPDC2Q9HBU9 364 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
SNX17-204ENST00000453453 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNX17-204ENST00000453453 DPYSL4O14531 572 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 PRRG1O14668 218 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 TNFRSF10BO14763 440 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms