RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 BBC3Q96PG8 261 aaPredicted RBP13.59□□□□□ -0.23
PTPA-224ENST00000453358 NUP58Q9BVL2 599 aa13.59□□□□□ -0.23
PTPA-224ENST00000453358 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
PTPA-224ENST00000453358 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
PTPA-224ENST00000453358 PNPLA8Q9NP80 782 aa13.59□□□□□ -0.23
PTPA-224ENST00000453358 EIF2B4Q9UI10 523 aaKnown RBP13.59□□□□□ -0.23
PTPA-224ENST00000453358 NAGPAQ9UK23 515 aa13.59□□□□□ -0.23
PTPA-224ENST00000453358 ZNF510Q9Y2H8 683 aa13.59□□□□□ -0.23
PTPA-224ENST00000453358 GOLGA4Q13439 2230 aaKnown RBP13.59□□□□□ -0.23
PTPA-224ENST00000453358 A0A1B0GVT2 93 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 FLRT2O43155 660 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 STX6O43752 255 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 PRKCHP24723 683 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 INCA1Q0VD86 236 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 SV2AQ7L0J3 742 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 ANKS1BQ7Z6G8 1248 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 TADA2BQ86TJ2 420 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 CACUL1Q86Y37 369 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 TAF4BQ92750 862 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 CYFIP2Q96F07 1278 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 PIWIL1Q96J94 861 aaKnown RBP13.58□□□□□ -0.24
PTPA-224ENST00000453358 CDC6Q99741 560 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 ELOVL2Q9NXB9 296 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 SLCO1B1Q9Y6L6 691 aa13.58□□□□□ -0.24
PTPA-224ENST00000453358 CKAP5Q14008 2032 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 CFAP46Q8IYW2 2715 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 PVALEFA0A1B0GWK0 134 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 POLR2DO15514 142 aaKnown RBP13.57□□□□□ -0.24
PTPA-224ENST00000453358 CUTAO60888 179 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 ACADMP11310 421 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 CHKAP35790 457 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 CSNK1EP49674 416 aaKnown RBP13.57□□□□□ -0.24
PTPA-224ENST00000453358 PSEN1P49768 467 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 CUL4BQ13620 913 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 EIF4HQ15056 248 aaKnown RBP13.57□□□□□ -0.24
PTPA-224ENST00000453358 C1orf220Q5T0J3 134 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 SLC9A9Q8IVB4 645 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 TMEM174Q8WUU8 243 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 LRIG1Q96JA1 1093 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 DCLK3Q9C098 648 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 PCED1AQ9H1Q7 454 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 CLIC5Q9NZA1 410 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 RASAL2Q9UJF2 1139 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 CLEC4EQ9ULY5 219 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 USP3Q9Y6I4 520 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 NUMA1Q14980 2115 aa13.57□□□□□ -0.24
PTPA-224ENST00000453358 TRABD2BA6NFA1 517 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 GOLGA8CPA6NN73 597 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 YEATS4O95619 227 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 HLA-DRAP01903 254 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 HMBSP08397 361 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 RALAP11233 206 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 PIK3CAP42336 1068 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 AFF3P51826 1226 aaKnown RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 COG7P83436 770 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 CYP4F3Q08477 520 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 EFEMP1Q12805 493 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 CAMK2BQ13554 666 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 E2F5Q15329 346 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 KIF19Q2TAC6 998 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 TMEM215Q68D42 235 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 FAM124AQ86V42 546 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 CPXM2Q8N436 756 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 TMC2Q8TDI7 906 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 CDK5RAP1Q96SZ6 601 aaKnown RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 NT5C1AQ9BXI3 368 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 CIPCQ9C0C6 399 aa13.56□□□□□ -0.24
PTPA-224ENST00000453358 C6orf106Q9H6K1 298 aaPredicted RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 APOBEC3GQ9HC16 384 aaKnown RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 AGO1Q9UL18 857 aaKnown RBP13.56□□□□□ -0.24
PTPA-224ENST00000453358 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPA-224ENST00000453358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
PTPA-224ENST00000453358 IKBKBO14920 756 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 KLRC4O43908 158 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 NR3C1P04150 777 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 EPHX1P07099 455 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 C7P10643 843 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 AFMP43652 599 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 STK4Q13043 487 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 CAMK2GQ13555 558 aaPredicted RBP13.55□□□□□ -0.24
PTPA-224ENST00000453358 SUZ12Q15022 739 aaKnown RBP13.55□□□□□ -0.24
PTPA-224ENST00000453358 PTPRNQ16849 979 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 SERPINA13PQ6UXR4 307 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 DENND1CQ8IV53 801 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 GALNT15Q8N3T1 639 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 KIAA0895Q8NCT3 520 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 OR2T3Q8NH03 318 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 SNX19Q92543 992 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 INTS4Q96HW7 963 aaKnown RBP13.55□□□□□ -0.24
PTPA-224ENST00000453358 DUSP16Q9BY84 665 aa13.55□□□□□ -0.24
PTPA-224ENST00000453358 SLC2A11Q9BYW1 496 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms