RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 EIF3CQ99613 913 aaKnown RBP4.61□□□□□ -1.67
USP40-209ENST00000452724 SAP30LQ9HAJ7 183 aa4.61□□□□□ -1.67
USP40-209ENST00000452724 VPS45Q9NRW7 570 aa4.61□□□□□ -1.67
USP40-209ENST00000452724 RXFP3Q9NSD7 469 aa4.61□□□□□ -1.67
USP40-209ENST00000452724 LRFN1Q9P244 771 aa4.61□□□□□ -1.67
USP40-209ENST00000452724 SCAF8Q9UPN6 1271 aaKnown RBP4.61□□□□□ -1.67
USP40-209ENST00000452724 TCRBV5S1A1TA0A578 114 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 ACKR2O00590 384 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 TRIM38O00635 465 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 DNPH1O43598 174 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 GCATO75600 419 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 TCEA3O75764 348 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 ITGB6P18564 788 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 MMP8P22894 467 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 KLRK1P26718 216 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 PTGER1P34995 402 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 SERPINF1P36955 418 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 CFHR3Q02985 330 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 CCDC15Q0P6D6 951 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 GRM4Q14833 912 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 PDCD2Q16342 344 aaPredicted RBP4.6□□□□□ -1.67
USP40-209ENST00000452724 PROSER3Q2NL68 480 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 TMEM63BQ5T3F8 832 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 PRAMEF17Q5VTA0 474 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 ZNF626Q68DY1 528 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 RINT1Q6NUQ1 792 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 MSANTD2Q6P1R3 559 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 DCDC5Q6ZRR9 648 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 KRT27Q7Z3Y8 459 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 NRSN1Q8IZ57 195 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 CACNA2D3Q8IZS8 1091 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
USP40-209ENST00000452724 EID2BQ96D98 161 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
USP40-209ENST00000452724 CCDC17Q96LX7 622 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 FYTTD1Q96QD9 318 aaKnown RBP4.6□□□□□ -1.67
USP40-209ENST00000452724 KATNAL1Q9BW62 490 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 TP63Q9H3D4 680 aaPredicted RBP4.6□□□□□ -1.67
USP40-209ENST00000452724 GAR1Q9NY12 217 aaKnown RBP4.6□□□□□ -1.67
USP40-209ENST00000452724 DACT1Q9NYF0 836 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 PCDHB2Q9Y5E7 798 aa4.6□□□□□ -1.67
USP40-209ENST00000452724 hCG_1642624A0A1W2PR95 340 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 BTBD19C9JJ37 291 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 POC1B-GALNT4F8VUJ3 575 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 UBE2Q2LH0YL09 131 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 IFRD1O00458 451 aaPredicted RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 FCHO1O14526 889 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 CTIFO43310 598 aaKnown RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 NHLRC4P0CG21 123 aaPredicted RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 AKT1P31749 480 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 GALNSP34059 522 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 CHKAP35790 457 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 RAE1P78406 368 aaKnown RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 SSBP2P81877 361 aaPredicted RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 FAM187BQ17R55 369 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 C4orf46Q504U0 113 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 MORN5Q5VZ52 161 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 ERAP2Q6P179 960 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 TMEM65Q6PI78 240 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 NEK8Q86SG6 692 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 GALNT4Q8N4A0 578 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 PNLDC1Q8NA58 520 aaKnown RBP4.59□□□□□ -1.67
USP40-209ENST00000452724 ADAMTS18Q8TE60 1221 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 DENND1AQ8TEH3 1009 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 WDR60Q8WVS4 1066 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 RITA1Q96K30 269 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 FBXO28Q9NVF7 368 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 GRHPRQ9UBQ7 328 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 FZD4Q9ULV1 537 aa4.59□□□□□ -1.67
USP40-209ENST00000452724 FNDC1Q4ZHG4 1894 aaPredicted RBP4.58□□□□□ -1.68
USP40-209ENST00000452724 CCDC187A0A096LP49 1063 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 PROB1E7EW31 1015 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 H3BNC9 293 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 M0QZQ0 153 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 CLIC1O00299 241 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 PPP6CO00743 305 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 FYB1O15117 783 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 CER1O95813 267 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 LATS1O95835 1130 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 BMP15O95972 392 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 MBPP02686 304 aaPredicted RBP4.58□□□□□ -1.68
USP40-209ENST00000452724 TUBB4AP04350 444 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 ITGA2BP08514 1039 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 CHRM5P08912 532 aaPredicted RBP4.58□□□□□ -1.68
USP40-209ENST00000452724 CYP2D6P10635 497 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 ALADP13716 330 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 IGHMBP2P38935 993 aaKnown RBP4.58□□□□□ -1.68
USP40-209ENST00000452724 JAK3P52333 1124 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 POLE2P56282 527 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 KCNB1Q14721 858 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 MFSD13AQ14CX5 517 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 CERKLQ49MI3 558 aaPredicted RBP4.58□□□□□ -1.68
USP40-209ENST00000452724 LIN54Q6MZP7 749 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 VSTM1Q6UX27 236 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 YTHDF3Q7Z739 585 aaKnown RBP4.58□□□□□ -1.68
USP40-209ENST00000452724 CHSY1Q86X52 802 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 MYCT1Q8N699 235 aa4.58□□□□□ -1.68
USP40-209ENST00000452724 OR1N1Q8NGS0 311 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms