RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 TAP1Q03518 808 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 KLF1Q13351 362 aaPredicted RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 TMEM154Q6P9G4 183 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 PHF13Q86YI8 300 aaPredicted RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 MPP5Q8N3R9 675 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 SERAC1Q96JX3 654 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 NIFKQ9BYG3 293 aaKnown RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 SDCBP2Q9H190 292 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 BARX2Q9UMQ3 279 aaPredicted RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 DNAJC16Q9Y2G8 782 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 SNX10Q9Y5X0 201 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 CXorf49A8MYA2 514 aaPredicted RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 PMPCBO75439 489 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 SERPINB5P36952 375 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 RTP1P59025 263 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 SLC25A3Q00325 362 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 NAF1Q96HR8 494 aaKnown RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 CAB39LQ9H9S4 337 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
DDR1-239ENST00000452441 GRID1Q9ULK0 1009 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 USP1O94782 785 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 LMO2P25791 158 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 NME5P56597 212 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 MTHFD1LQ6UB35 978 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 FAM13CQ8NE31 585 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 FAXDC2Q96IV6 333 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 CNPY3Q9BT09 278 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 CYP4F12Q9HCS2 524 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 ZNF112Q9UJU3 913 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 TLK1Q9UKI8 766 aa11.53□□□□□ -0.56
DDR1-239ENST00000452441 CCNB1P14635 433 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 YBX3P16989 372 aaKnown RBP eCLIP11.52□□□□□ -0.564e-7■□□□□ 9.7
DDR1-239ENST00000452441 MAP1BP46821 2468 aaKnown RBP11.52□□□□□ -0.56
DDR1-239ENST00000452441 PLK1P53350 603 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 GPX6P59796 221 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 BST1Q10588 318 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 ASPHQ12797 758 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 CCDC14Q49A88 953 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 HSP90AA5PQ58FG0 334 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 FBXO47Q5MNV8 452 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 ZNF618Q5T7W0 954 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 MIB1Q86YT6 1006 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 MAB21L3Q8N8X9 362 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 IPMKQ8NFU5 416 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 FBXL18Q96ME1 805 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 NMUR2Q9GZQ4 415 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 ABHD16BQ9H3Z7 469 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 DDIT4Q9NX09 232 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 ABI2Q9NYB9 513 aaPredicted RBP11.52□□□□□ -0.56
DDR1-239ENST00000452441 GTSE1Q9NYZ3 720 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 TNFSF13BQ9Y275 285 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 STARD13Q9Y3M8 1113 aa11.52□□□□□ -0.56
DDR1-239ENST00000452441 SIGLEC16A6NMB1 481 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 PAPSS1O43252 624 aaPredicted RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 TREHO43280 583 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 TCEA3O75764 348 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 ENO3P13929 434 aaPredicted RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 OR1G1P47890 313 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 NDUFV1P49821 464 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 SLC26A2P50443 739 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 DEUP1Q05D60 604 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 SDHAF4Q5VUM1 108 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 ATG16L1Q676U5 607 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 DEFB106AQ8N104 65 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.575e-7■■■■■ 43.7
DDR1-239ENST00000452441 SNX31Q8N9S9 440 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 PYDC1Q8WXC3 89 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 GBP5Q96PP8 586 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 GSTA2P09210 222 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 ELNP15502 786 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 EIF4BP23588 611 aaKnown RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 KLRC2P26717 231 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 TAF6P49848 677 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 FASTKD1Q53R41 847 aaKnown RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 RNASEH2BQ5TBB1 312 aaKnown RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 ARHGAP24Q8N264 748 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 RIBC1Q8N443 379 aaPredicted RBP11.52□□□□□ -0.57
DDR1-239ENST00000452441 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 NSL1Q96IY1 281 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 CXCL16Q9H2A7 254 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 RNPEPL1Q9HAU8 725 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 PAK5Q9P286 719 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 ACTL7BQ9Y614 415 aa11.52□□□□□ -0.57
DDR1-239ENST00000452441 ZNFX1Q9P2E3 1918 aaKnown RBP11.51□□□□□ -0.57
DDR1-239ENST00000452441 hCG_2014768A0A024R1R8 64 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms