RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 SEMA4DQ92854 862 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
LINC01004-202ENST00000450686 HNRNPABQ99729 332 aaKnown RBP10.68□□□□□ -0.7
LINC01004-202ENST00000450686 GPR174Q9BXC1 333 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 MKRN2Q9H000 416 aaKnown RBP10.68□□□□□ -0.7
LINC01004-202ENST00000450686 MIR1-1HGQ9H1L0 117 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 FBXO44Q9H4M3 255 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 SLC32A1Q9H598 525 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 IL21RQ9HBE5 538 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 COMMD8Q9NX08 183 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 MARK1Q9P0L2 795 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 CGNQ9P2M7 1197 aaKnown RBP10.68□□□□□ -0.7
LINC01004-202ENST00000450686 LSM7Q9UK45 103 aaKnown RBP10.68□□□□□ -0.7
LINC01004-202ENST00000450686 STARD13Q9Y3M8 1113 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 STON1Q9Y6Q2 735 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 CKAP5Q14008 2032 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 PLXNB3Q9ULL4 1909 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 TMEM131Q92545 1883 aa10.68□□□□□ -0.7
LINC01004-202ENST00000450686 TAF4O00268 1085 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 TULP2O00295 520 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 TSPAN3O60637 253 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 NDUFS2O75306 463 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 P4HA1P13674 534 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 HLA-EP13747 358 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 PRKCHP24723 683 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 CORO1AP31146 461 aaKnown RBP10.67□□□□□ -0.7
LINC01004-202ENST00000450686 VAMP7P51809 220 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 KIF11P52732 1056 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 AP3M2P53677 418 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 MFAP3P55082 362 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 INCA1Q0VD86 236 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 GRIK2Q13002 908 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 BYSLQ13895 437 aaKnown RBP10.67□□□□□ -0.7
LINC01004-202ENST00000450686 FYB2Q5VWT5 728 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 SDE2Q6IQ49 451 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 SLC36A4Q6YBV0 504 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 UNC93AQ86WB7 457 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 DENND1CQ8IV53 801 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 SLC9A9Q8IVB4 645 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 SMYD4Q8IYR2 804 aaPredicted RBP10.67□□□□□ -0.7
LINC01004-202ENST00000450686 TATDN2Q93075 761 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 TOE1Q96GM8 510 aaKnown RBP10.67□□□□□ -0.7
LINC01004-202ENST00000450686 NT5C1AQ9BXI3 368 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 WDR35Q9P2L0 1181 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 DNMT3LQ9UJW3 386 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 CABIN1Q9Y6J0 2220 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 ACACAQ13085 2346 aa10.67□□□□□ -0.7
LINC01004-202ENST00000450686 GOLGA4Q13439 2230 aaKnown RBP10.66□□□□□ -0.7
LINC01004-202ENST00000450686 MEI4A8MW99 385 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 PDXKO00764 312 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 CILPO75339 1184 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 RPN1P04843 607 aaKnown RBP10.66□□□□□ -0.7
LINC01004-202ENST00000450686 NR2F2P24468 414 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 BNC1Q01954 994 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 RING1Q06587 406 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 SPDYCQ5MJ68 293 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 TMEM215Q68D42 235 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 C19orf48Q6RUI8 117 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 LAYNQ6UX15 382 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 CEP76Q8TAP6 659 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 NIF3L1Q9GZT8 377 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 PRDM16Q9HAZ2 1276 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 RCOR1Q9UKL0 485 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 AGO1Q9UL18 857 aaKnown RBP10.66□□□□□ -0.7
LINC01004-202ENST00000450686 FRMD4BQ9Y2L6 1034 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 NEUROG3Q9Y4Z2 214 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 MUC22E2RYF6 1773 aaPredicted RBP10.66□□□□□ -0.7
LINC01004-202ENST00000450686 PTPRBP23467 1997 aa10.66□□□□□ -0.7
LINC01004-202ENST00000450686 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 TP53BP1Q12888 1972 aaPredicted RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 SLC12A8A0AV02 714 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 PIK3R2O00459 728 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 ZNF217O75362 1048 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 GJB3O75712 270 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 PENKP01210 267 aaPredicted RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 CALCAP01258 141 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 HSP90AA1P07900 732 aaKnown RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 NCAM1P13591 858 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 CD6P30203 668 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 PLA2G4AP47712 749 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 SGSHP51688 502 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 NDUFA8P51970 172 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 GOLGA8FQ08AF8 430 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 GOLGA8DPQ0D2H9 430 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 ZNF234Q14588 700 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 DCAF12L1Q5VU92 463 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 CCDC186Q7Z3E2 898 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 NAXDQ8IW45 347 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 FAM186BQ8IYM0 893 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 SLC4A11Q8NBS3 891 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 CYB5D2Q8WUJ1 264 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 SNX19Q92543 992 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 TAF4BQ92750 862 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 ZNF419Q96HQ0 510 aaPredicted RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 PIWIL1Q96J94 861 aaKnown RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 HEXIM2Q96MH2 286 aaKnown RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 DUSP9Q99956 384 aaKnown RBP10.65□□□□□ -0.7
LINC01004-202ENST00000450686 DUSP16Q9BY84 665 aa10.65□□□□□ -0.7
LINC01004-202ENST00000450686 CIPCQ9C0C6 399 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms