RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ACDQ96AP0 544 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 RMDN1Q96DB5 314 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 UBXN6Q9BZV1 441 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 AIPL1Q9NZN9 384 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 RASAL2Q9UJF2 1139 aa17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 BZW2Q9Y6E2 419 aaKnown RBP17.84■□□□□ 0.45
PRPF40A-204ENST00000450303 MYO18AQ92614 2054 aaKnown RBP17.83■□□□□ 0.45
PRPF40A-204ENST00000450303 TRIM24O15164 1050 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 AXIN1O15169 862 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 VDRP11473 427 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 PLA2G4AP47712 749 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 PSEN1P49768 467 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 SLC8A3P57103 927 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 GOLGA8FQ08AF8 430 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 GOLGA8DPQ0D2H9 430 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 EFEMP1Q12805 493 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 RAB41Q5JT25 222 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 BTBD8Q5XKL5 378 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 CAMKK1Q8N5S9 505 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 FAM160A2Q8N612 972 aaPredicted RBP17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 GAB3Q8WWW8 586 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 TFAP2BQ92481 460 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 DNAJC7Q99615 494 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 ULBP1Q9BZM6 244 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 ABHD10Q9NUJ1 306 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 HESX1Q9UBX0 185 aa17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 LSM7Q9UK45 103 aaKnown RBP17.83■□□□□ 0.44
PRPF40A-204ENST00000450303 SPAG17Q6Q759 2223 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 HOXC11O43248 304 aaPredicted RBP17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 MED7O43513 233 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 TULP3O75386 442 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 RPP40O75818 363 aaKnown RBP17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 STC2O76061 302 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 KLF8O95600 359 aaPredicted RBP17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 APBB3O95704 486 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 TGM1P22735 817 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 EIF2DP41214 584 aaKnown RBP17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 GRIA2P42262 883 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 DGKEP52429 567 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 BCAT1P54687 386 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 YWHAGP61981 247 aaKnown RBP eCLIP17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 ARID5AQ03989 594 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 KLHL30Q0D2K2 578 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 ARID5BQ14865 1188 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 KLHDC10Q6PID8 442 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 KBTBD6Q86V97 674 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 ETFBKMTQ8IXQ9 262 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 PHTF2Q8N3S3 785 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 ALLCQ8N6M5 410 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 TC2NQ8N9U0 490 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 CCDC26Q8TAB7 109 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 PANX2Q96RD6 677 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 LRRC4Q9HBW1 653 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 CLIC5Q9NZA1 410 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 INVSQ9Y283 1065 aa17.82■□□□□ 0.44
PRPF40A-204ENST00000450303 CCDC163A0A0D9SF12 145 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 TBC1D3BA6NDS4 549 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 NEDD8-MDP1E9PL57 170 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 O00370 1275 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 PIK3R2O00459 728 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 XPO1O14980 1071 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 DCLK1O15075 740 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 ZBED1O96006 694 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 SERPING1P05155 500 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 RETP07949 1114 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 HNRNPLP14866 589 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 GNA15P30679 374 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 HNRNPH3P31942 346 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 RGS7P49802 495 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 MRPS21P82921 87 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 BST2Q10589 180 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 STILQ15468 1287 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 TDRD12Q587J7 1177 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 RSRC2Q7L4I2 434 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 TADA2BQ86TJ2 420 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 VPS36Q86VN1 386 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 ZNF677Q86XU0 584 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 TXNDC5Q8NBS9 432 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 TSTD1Q8NFU3 115 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 BHMTQ93088 406 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 ZSWIM1Q9BR11 485 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 BBS2Q9BXC9 721 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 TPSD1Q9BZJ3 242 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 DEC1Q9P2X7 70 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 MMP17Q9ULZ9 603 aa17.81■□□□□ 0.44
PRPF40A-204ENST00000450303 A0A0A0MRY4 1105 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 SGK1O00141 431 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 THAP12O43422 761 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 KLKB1P03952 638 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 PNMA6AP0CW24 399 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 LCP1P13796 627 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 TYRP14679 529 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 BRD2P25440 801 aaKnown RBP17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 PRKCIP41743 596 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 TNFRSF4P43489 277 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 KIR2DL1P43626 348 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 ZNF132P52740 706 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 ADIGQ0VDE8 80 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 RSPO4Q2I0M5 234 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms