RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 A0A1W2PQH9 124 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 WDR27A2RRH5 827 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 GOLGA6BA6NDN3 693 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 H3BRJ5 948 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 ADAM12O43184 909 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 PPFIA2O75334 1257 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 STIP1P31948 543 aaKnown RBP14.78□□□□□ -0.04
USP39-207ENST00000450066 OR1D2P34982 312 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 NR2C2P49116 596 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 PGFP49763 221 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 USP46P62068 366 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 DSG1Q02413 1049 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 DHX9Q08211 1270 aaKnown RBP14.78□□□□□ -0.04
USP39-207ENST00000450066 DUSP4Q13115 394 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 GLIS1Q8NBF1 620 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 RSAD2Q8WXG1 361 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 CEP295NLQ96MC4 621 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 HERC2P3Q9BVR0 1158 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 ANLNQ9NQW6 1124 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 HEY1Q9Y5J3 304 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 I6L893 689 aaPredicted RBP14.78□□□□□ -0.04
USP39-207ENST00000450066 SOAT2O75908 522 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 FGBP02675 491 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 YWHAQP27348 245 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 GLUD2P49448 558 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 VPS41P49754 854 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 ZNF135P52742 658 aaPredicted RBP14.78□□□□□ -0.04
USP39-207ENST00000450066 RHBDF2Q6PJF5 856 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 DDX53Q86TM3 631 aaKnown RBP14.78□□□□□ -0.04
USP39-207ENST00000450066 IQCKQ8N0W5 287 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 TXLNGYQ9BZA5 131 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 ARHGEF4Q9NR80 690 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 ANAPC5Q9UJX4 755 aa14.78□□□□□ -0.04
USP39-207ENST00000450066 PLXNA3P51805 1871 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 IRAK2O43187 625 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 RRP9O43818 475 aaKnown RBP14.77□□□□□ -0.04
USP39-207ENST00000450066 IFNB1P01574 187 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 ZSCAN5DPP0CG00 497 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 RPL17P18621 184 aaKnown RBP14.77□□□□□ -0.04
USP39-207ENST00000450066 PPM1AP35813 382 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 HCAR3P49019 387 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 ITGA8P53708 1063 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 FPGSQ05932 587 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 SEMA3BQ13214 749 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 MTMR3Q13615 1198 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 P3H1Q32P28 736 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 SPDYCQ5MJ68 293 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 DARS2Q6PI48 645 aaKnown RBP14.77□□□□□ -0.04
USP39-207ENST00000450066 PRUNE1Q86TP1 453 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 ZC3H18Q86VM9 953 aaKnown RBP14.77□□□□□ -0.04
USP39-207ENST00000450066 STKLD1Q8NE28 680 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 GPR152Q8TDT2 470 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 CLSTN3Q9BQT9 956 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 TKTL2Q9H0I9 626 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 TSPYL1Q9H0U9 437 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 OSER1Q9NX31 292 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 HSFX1Q9UBD0 423 aa14.77□□□□□ -0.04
USP39-207ENST00000450066 ZBBXA8MT70 800 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 H7C0C1 242 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 C2CD2LO14523 706 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 NDC80O14777 642 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 GJB5O95377 273 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 ETS1P14921 441 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 AMPD1P23109 780 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 HSD17B3P37058 310 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 ATP5OP48047 213 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 TUFMP49411 452 aaKnown RBP14.77□□□□□ -0.05
USP39-207ENST00000450066 PSEN1P49768 467 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 GDF10P55107 478 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 GPS1Q13098 491 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 XRCC4Q13426 336 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 DPYSQ14117 519 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 BRMS1LQ5PSV4 323 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 CFAP58Q5T655 872 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 IZUMO3Q5VZ72 239 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 NCBP2-AS2Q69YL0 99 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 RFX8Q6ZV50 586 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 UNC45BQ8IWX7 931 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 ZNF461Q8TAF7 563 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 CASP10Q92851 521 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 BADQ92934 168 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 RNF34Q969K3 372 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 FBXO32Q969P5 355 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 C10orf88Q9H8K7 445 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 AAASQ9NRG9 546 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 ARHGEF38Q9NXL2 777 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 CLIC5Q9NZA1 410 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 GMIPQ9P107 970 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 STK39Q9UEW8 545 aa14.77□□□□□ -0.05
USP39-207ENST00000450066 AFF4Q9UHB7 1163 aaKnown RBP14.77□□□□□ -0.05
USP39-207ENST00000450066 BCLAF3A2AJT9 711 aaKnown RBP14.76□□□□□ -0.05
USP39-207ENST00000450066 CFAP69A5D8W1 941 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 EEF2KO00418 725 aaKnown RBP14.76□□□□□ -0.05
USP39-207ENST00000450066 DNALI1O14645 258 aaPredicted RBP14.76□□□□□ -0.05
USP39-207ENST00000450066 CREB3O43889 395 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 ABLIM3O94929 683 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 HTRA4P83105 476 aaPredicted RBP14.76□□□□□ -0.05
USP39-207ENST00000450066 GBE1Q04446 702 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms