RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 PCSK4Q6UW60 755 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 TRMT11Q7Z4G4 463 aaKnown RBP10.49□□□□□ -0.73
LINC02561-201ENST00000449457 LIMS2Q7Z4I7 341 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 GLRX5Q86SX6 157 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 GATAD2AQ86YP4 633 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 SYCP3Q8IZU3 236 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 DNAJC19Q96DA6 116 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 ANKRD36BP1Q96IX9 119 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 C8orf48Q96LL4 319 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 FCRL3Q96P31 734 aaPredicted RBP10.49□□□□□ -0.73
LINC02561-201ENST00000449457 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 ACCSQ96QU6 501 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 MED10Q9BTT4 135 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 NACA2Q9H009 215 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 SDCBP2Q9H190 292 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 CAAP1Q9H8G2 361 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 KRT82Q9NSB4 513 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 INTS13Q9NVM9 706 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
LINC02561-201ENST00000449457 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 CLEC4EQ9ULY5 219 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 COL5A1P20908 1838 aaPredicted RBP10.49□□□□□ -0.73
LINC02561-201ENST00000449457 PTPRQQ9UMZ3 2332 aa10.49□□□□□ -0.73
LINC02561-201ENST00000449457 A0A087WV48 116 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 A0A087X0B3 334 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 H0Y8X5 98 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 BCAT2O15382 392 aaPredicted RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 CYP26A1O43174 497 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 GNL1P36915 607 aaPredicted RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 DGKGP49619 791 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 CASP4P49662 377 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 TPMTP51580 245 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 SLC14A1Q13336 389 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 HNRNPDQ14103 355 aaKnown RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 WDR45BQ5MNZ6 344 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 HECTD3Q5T447 861 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 PAQR9Q6ZVX9 377 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 RABEPKQ7Z6M1 372 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 NUP93Q8N1F7 819 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 B3GALNT2Q8NCR0 500 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 ZMIZ2Q8NF64 920 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 TPCN2Q8NHX9 752 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 NAF1Q96HR8 494 aaKnown RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 CLIC6Q96NY7 704 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 UBL7Q96S82 380 aaPredicted RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 KIF2CQ99661 725 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 SEMA4CQ9C0C4 833 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 FAM124BQ9H5Z6 455 aaPredicted RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 USP36Q9P275 1121 aaKnown RBP10.48□□□□□ -0.73
LINC02561-201ENST00000449457 TBC1D14Q9P2M4 693 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 SUSD2Q9UGT4 822 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 KCNG1Q9UIX4 513 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 COL12A1Q99715 3063 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 CABIN1Q9Y6J0 2220 aa10.48□□□□□ -0.73
LINC02561-201ENST00000449457 MYLKQ15746 1914 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 A8MXQ7 604 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 J3QL48 77 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 CACNG3O60359 315 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 TLR5O60602 858 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 DKK1O94907 266 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 CER1O95813 267 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 TNNC2P02585 160 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 CISD3P0C7P0 127 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 ACSL1P33121 698 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 COPAP53621 1224 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 MYL6P60660 151 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 RILPL1Q5EBL4 403 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 DDX42Q86XP3 938 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC02561-201ENST00000449457 NT5DC4Q86YG4 428 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 GPD1LQ8N335 351 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 SNIP1Q8TAD8 396 aaKnown RBP10.47□□□□□ -0.73
LINC02561-201ENST00000449457 DNASE2BQ8WZ79 361 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 SMOQ99835 787 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 PANK2Q9BZ23 570 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 ST6GALNAC4Q9H4F1 302 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 MTG2Q9H4K7 406 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 PRORYQ9H606 182 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 NMUR1Q9HB89 426 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 FAM49BQ9NUQ9 324 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
LINC02561-201ENST00000449457 CKAP5Q14008 2032 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 HECTD1Q9ULT8 2610 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 CLIC2O15247 247 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 ATXN7O15265 892 aaPredicted RBP10.46□□□□□ -0.73
LINC02561-201ENST00000449457 FLRT2O43155 660 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 LILRA1O75019 489 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 GJB2P29033 226 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 ADORA2BP29275 332 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 HOXD13P35453 343 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 NUMBP49757 651 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 CYP2J2P51589 502 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 MAP3K7CLP57077 242 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 CCDC173Q0VFZ6 552 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 NNTQ13423 1086 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 ZNF234Q14588 700 aa10.46□□□□□ -0.73
LINC02561-201ENST00000449457 POSTNQ15063 836 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms