RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 FRMD1Q8N878 549 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 UBA3Q8TBC4 463 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 UCMAQ8WVF2 138 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 NELFBQ8WX92 580 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 CNTNAP3BQ96NU0 1288 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 NUSAP1Q9BXS6 441 aaKnown RBP11.31□□□□□ -0.6
SRRT-205ENST00000449389 SLC2A11Q9BYW1 496 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 CNTNAP3Q9BZ76 1288 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 CNGB3Q9NQW8 809 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 ABCC13Q9NSE7 274 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 HBS1LQ9Y450 684 aaKnown RBP11.31□□□□□ -0.6
SRRT-205ENST00000449389 PCDHB4Q9Y5E5 795 aa11.31□□□□□ -0.6
SRRT-205ENST00000449389 THADAQ6YHU6 1953 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 KCNK5O95279 499 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 GNA14O95837 355 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 HARS2P49590 506 aaKnown RBP11.3□□□□□ -0.6
SRRT-205ENST00000449389 ZNF132P52740 706 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 ZNF445P59923 1031 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 IRX4P78413 519 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 GCNT1Q02742 428 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
SRRT-205ENST00000449389 CNGA2Q16280 664 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 PKDCCQ504Y2 493 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 MPPE1Q53F39 396 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 TRIM61Q5EBN2 209 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
SRRT-205ENST00000449389 BSPRYQ5W0U4 402 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 KIAA1211LQ6NV74 962 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 ANKS1BQ7Z6G8 1248 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 RABEPKQ7Z6M1 372 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 FMNL3Q8IVF7 1028 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 FAM217AQ8IXS0 508 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 DDI1Q8WTU0 396 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 IRGQQ8WZA9 623 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 TFAP2BQ92481 460 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 NDRG1Q92597 394 aaKnown RBP11.3□□□□□ -0.6
SRRT-205ENST00000449389 P2RY11Q96G91 374 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 PIWIL1Q96J94 861 aaKnown RBP11.3□□□□□ -0.6
SRRT-205ENST00000449389 THAP10Q9P2Z0 257 aaPredicted RBP11.3□□□□□ -0.6
SRRT-205ENST00000449389 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 RAD54BQ9Y620 910 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 PLXND1Q9Y4D7 1925 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 NUP205Q92621 2012 aa11.3□□□□□ -0.6
SRRT-205ENST00000449389 IGHV1OR15-9A0A0B4J2B8 117 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 YJEFN3A6XGL0 299 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 E7ENQ6 273 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 M0QYV0 167 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 LATS1O95835 1130 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 LCP1P13796 627 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 BMP6P22004 513 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
SRRT-205ENST00000449389 MARSP56192 900 aaKnown RBP11.29□□□□□ -0.6
SRRT-205ENST00000449389 DAOAP59103 153 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 PAK1Q13153 545 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 ENPP2Q13822 863 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 GEN1Q17RS7 908 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 N4BP2L1Q5TBK1 243 aaPredicted RBP11.29□□□□□ -0.6
SRRT-205ENST00000449389 SLC23A3Q6PIS1 610 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 RBBP8NLQ8NC74 664 aaPredicted RBP11.29□□□□□ -0.6
SRRT-205ENST00000449389 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 LMO3Q8TAP4 145 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 CEP76Q8TAP6 659 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 SLC35F5Q8WV83 523 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 EDEM1Q92611 657 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 KAT5Q92993 513 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 MRGPRX1Q96LB2 322 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 TMEM74BQ9NUR3 256 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 ELOVL2Q9NXB9 296 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 STOML2Q9UJZ1 356 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 PILRBQ9UKJ0 227 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 CYP8B1Q9UNU6 501 aa11.29□□□□□ -0.6
SRRT-205ENST00000449389 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRRT-205ENST00000449389 ATXN2Q99700 1313 aaKnown RBP11.29□□□□□ -0.6
SRRT-205ENST00000449389 WASH3PC4AMC7 463 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 RNF225M0QZC1 329 aaPredicted RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 BIN1O00499 593 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 TIMM44O43615 452 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 GADD45BO75293 160 aaPredicted RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 NDUFS2O75306 463 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 FBXO21O94952 628 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 FGFR1OPO95684 399 aaKnown RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 AFPP02771 609 aaKnown RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 CFIP05156 583 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 CSRP1P21291 193 aaKnown RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 ITPKAP23677 461 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
SRRT-205ENST00000449389 PMLP29590 882 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 IL12RB1P42701 662 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 RGS7P49802 495 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 STX17P56962 302 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 ZNF33AQ06730 810 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
SRRT-205ENST00000449389 DUOXA1Q1HG43 343 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms