RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SLC16A4O15374 487 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PEX10O60683 326 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 DNAJA2O60884 412 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SPAG6O75602 509 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 CNMDO75829 334 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 DLDP09622 509 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 IVDP26440 423 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 GCAP28676 217 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 CCT8P50990 548 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 ATP1A4Q13733 1029 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 CNGA3Q16281 694 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 TAS1R3Q7RTX0 852 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PALM2Q8IXS6 379 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 RNF169Q8NCN4 708 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 KMT5AQ9NQR1 393 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PRELID1Q9Y255 219 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 DRG1Q9Y295 367 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 COQ4Q9Y3A0 265 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 KPNA1P52294 538 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SLC5A3P53794 718 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 ACTR2P61160 394 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SIX1Q15475 284 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 BRDTQ58F21 947 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 XKR9Q5GH70 373 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 ITPRIPL1Q6GPH6 555 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 GSDMBQ8TAX9 411 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SHKBP1Q8TBC3 707 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PSPC1Q8WXF1 523 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SH3GL1Q99961 368 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PARVBQ9HBI1 364 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 MAFBQ9Y5Q3 323 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 A0A0G2JLL6 359 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 ADRB2P07550 413 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PABPC1P11940 636 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 HADHQ16836 314 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 FAM102BQ5T8I3 360 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 LMBRD2Q68DH5 695 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 DRICH1Q6PGQ1 229 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PRRT2Q7Z6L0 340 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 RIOX2Q8IUF8 465 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 APBB2Q92870 758 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 CDHR1Q96JP9 859 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 MAK16Q9BXY0 300 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 PPARGC1AQ9UBK2 798 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 SLC9A2Q9UBY0 812 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 TAGLN3Q9UI15 199 aa13.9□□□□□ -0.18
SYNGAP1-204ENST00000449372 FAM47E-STBD1D6RA91 191 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 PEX1O43933 1283 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 KRT1P04264 644 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 GJC1P36383 396 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 YWHAEP62258 255 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 CD300CQ08708 224 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 APOFQ13790 326 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 GK3PQ14409 553 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 TRIML2Q8N7C3 387 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 ERLEC1Q96DZ1 483 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 ADM5C9JUS6 153 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 MGEA5O60502 916 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 DGKIO75912 1065 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 HSPA8P11142 646 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 RALAP11233 206 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 RAG1P15918 1043 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 PCYT1AP49585 367 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 CNTN2Q02246 1040 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 LRRC38Q5VT99 294 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 FAAH2Q6GMR7 532 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 NIPAL1Q6NVV3 410 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 AMIGO2Q86SJ2 522 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 RSPH3Q86UC2 560 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 SLC47A2Q86VL8 602 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 MCPH1Q8NEM0 835 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 BORCS5Q969J3 196 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 R3HDMLQ9H3Y0 253 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 FBXO9Q9UK97 447 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 USTQ9Y2C2 406 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 N6AMT1Q9Y5N5 214 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 IVNS1ABPQ9Y6Y0 642 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 A0A088AWK7 358 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 CAPN14A8MX76 684 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 MCF2LO15068 1137 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 MT-ND3P03897 115 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 PSAPP07602 524 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 FAM58BPP0C7Q3 252 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 GARTP22102 1010 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 POLR2BP30876 1174 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 PSMD6Q15008 389 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 EFTUD2Q15029 972 aaKnown RBP eCLIP13.89□□□□□ -0.198e-8■■■■■ 37.9
SYNGAP1-204ENST00000449372 TBCCQ15814 346 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 ARL13BQ3SXY8 428 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 SWSAP1Q6NVH7 229 aa13.89□□□□□ -0.19
SYNGAP1-204ENST00000449372 PDIK1LQ8N165 341 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms