RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 INTS7Q9NVH2 962 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ZNF221Q9UK13 617 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ZMYM3Q14202 1370 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 RNF123Q5XPI4 1314 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CLRN2A0PK11 232 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 STMND1H3BQB6 276 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ZNF208O43345 1280 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 BMP7P18075 431 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 RRM1P23921 792 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SCRN1Q12765 414 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MTAPQ13126 283 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 PRKG2Q13237 762 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 KCNA10Q16322 511 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 NET1Q7Z628 596 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 KBTBD2Q8IY47 623 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MSANTD3Q96H12 275 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SENP7Q9BQF6 1050 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CDH19Q9H159 772 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 NCKAP1Q9Y2A7 1128 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 PCDH11YQ9BZA8 1340 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ECHS1P30084 290 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 SOX11P35716 441 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 CDC42P60953 191 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 FGD3Q5JSP0 725 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 ATCAYQ86WG3 371 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 OR5T3Q8NGG3 340 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 FATE1Q969F0 183 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 REXO5Q96IC2 774 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 MAGEB18Q96M61 343 aa9.16□□□□□ -0.94
NIPBL-202ENST00000448238 FRMD8P1Q9BZ68 369 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
NIPBL-202ENST00000448238 TNKSO95271 1327 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 A0A1B0GVC2 190 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 KIAA0391O15091 583 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 CYP7B1O75881 506 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SLC2A3P11169 496 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 AFF1P51825 1210 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SCGB2A2Q13296 93 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 IL31Q6EBC2 164 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 FAM171BQ6P995 826 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 ARID3BQ8IVW6 561 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SIPA1Q96FS4 1042 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 KLHL5Q96PQ7 755 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 AASSQ9UDR5 926 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 CASKIN1Q8WXD9 1431 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 TRIM64BA6NI03 449 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 IFNA7P01567 189 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 HOXB7P09629 217 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 ITGA2P17301 1181 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SAMD4BQ5PRF9 694 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SLC7A14Q8TBB6 771 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 TDRD1Q9BXT4 1180 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 CHRAC1Q9NRG0 131 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 PTGFRNQ9P2B2 879 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SNX6Q9UNH7 406 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 GNPATO15228 680 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 ANXA1P04083 346 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 FDFT1P37268 417 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 PGDP52209 483 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 CARTPTQ16568 116 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 UNC13DQ70J99 1090 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 PHACTR4Q8IZ21 702 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 ADAM32Q8TC27 787 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 PNKPQ96T60 521 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 KANSL2Q9H9L4 492 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 RSAD1Q9HA92 442 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 MAP10Q9P2G4 905 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SUCOQ9UBS9 1254 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 EGFRP00533 1210 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 SRCP12931 536 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 CHRNA5P30532 468 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 HARS2P49590 506 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 MSLNQ13421 630 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 PREPLQ4J6C6 727 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 DDX47Q9H0S4 455 aaKnown RBP9.15□□□□□ -0.94
NIPBL-202ENST00000448238 KCNN2Q9H2S1 579 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 TELO2Q9Y4R8 837 aa9.15□□□□□ -0.94
NIPBL-202ENST00000448238 WEE2P0C1S8 567 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ATP5JP18859 108 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 GRK5P34947 590 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 MLLT6P55198 1093 aaPredicted RBP9.15□□□□□ -0.95
NIPBL-202ENST00000448238 SLC10A7Q0GE19 358 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ATG9AQ7Z3C6 839 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 LRRC47Q8N1G4 583 aaKnown RBP9.15□□□□□ -0.95
NIPBL-202ENST00000448238 MYO1HQ8N1T3 1032 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 KIF2BQ8N4N8 673 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ART5Q96L15 291 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 AGAP3Q96P47 875 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 SETD4Q9NVD3 440 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 SH3BP1Q9Y3L3 701 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ADCY9O60503 1353 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 INPP4BO15327 924 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 THEGLP0DJG4 465 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 MYBL2P10244 700 aa9.15□□□□□ -0.95
NIPBL-202ENST00000448238 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.95
NIPBL-202ENST00000448238 ARHGAP15Q53QZ3 475 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms