RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 NKIRAS1Q9NYS0 192 aa20.21■□□□□ 0.83
FAM3A-215ENST00000447601 RABGEF1Q9UJ41 708 aa20.21■□□□□ 0.83
FAM3A-215ENST00000447601 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
FAM3A-215ENST00000447601 SPAG6O75602 509 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 EOMESO95936 686 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 SSTR1P30872 391 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 GKAP1Q5VSY0 366 aaPredicted RBP20.2■□□□□ 0.82
FAM3A-215ENST00000447601 OVOS1Q6IE37 1185 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 GLB1LQ6UWU2 654 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 ARHGEF18Q6ZSZ5 1173 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 CCDC110Q8TBZ0 833 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 SUSD3Q96L08 255 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 DMAP1Q9NPF5 467 aaPredicted RBP20.2■□□□□ 0.82
FAM3A-215ENST00000447601 CHMP2BQ9UQN3 213 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 FAM169AQ9Y6X4 670 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 DGKIO75912 1065 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 F9P00740 461 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 NCAM1P13591 858 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 TYMPP19971 482 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 ELK3P41970 407 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 RABGGTBP53611 331 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 SCAPQ12770 1279 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 SCML4Q8N228 414 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 ANKRD42Q8N9B4 389 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 FBF1Q8TES7 1133 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 HASPINQ8TF76 798 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 PKMYT1Q99640 499 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 FERMT1Q9BQL6 677 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 PNPLA8Q9NP80 782 aa20.2■□□□□ 0.82
FAM3A-215ENST00000447601 FOXO6A8MYZ6 492 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 ZNF189O75820 626 aaPredicted RBP20.19■□□□□ 0.82
FAM3A-215ENST00000447601 GNRH1P01148 92 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 KRT15P19012 456 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 ADRA1BP35368 520 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 IFNAR2P48551 515 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 TSPY1Q01534 308 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 QPCTQ16769 361 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 SLC24A5Q71RS6 500 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 MCUQ8NE86 351 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 MGARPQ8TDB4 240 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 TRIM62Q9BVG3 475 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 NSRP1Q9H0G5 558 aaKnown RBP20.19■□□□□ 0.82
FAM3A-215ENST00000447601 TRPV6Q9H1D0 765 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 ETNK1Q9HBU6 452 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 TEX264Q9Y6I9 313 aa20.19■□□□□ 0.82
FAM3A-215ENST00000447601 EEF2KO00418 725 aaKnown RBP20.18■□□□□ 0.82
FAM3A-215ENST00000447601 CREB3O43889 395 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TRPA1O75762 1119 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 APRTP07741 180 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 BDNFP23560 247 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 ARL13BQ3SXY8 428 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 PM20D1Q6GTS8 502 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 RFX8Q6ZV50 586 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 HTR3CQ8WXA8 447 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 CYTH2Q99418 400 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 RHOBTB2Q9BYZ6 727 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 WDR6Q9NNW5 1121 aaKnown RBP20.18■□□□□ 0.82
FAM3A-215ENST00000447601 DDIT4Q9NX09 232 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 FBXW11Q9UKB1 542 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 FAM47DPA6NHR8 397 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 MFSD11O43934 449 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 STK10O94804 968 aaKnown RBP20.18■□□□□ 0.82
FAM3A-215ENST00000447601 KIAA0754O94854 1291 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TPSB2P20231 275 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 YY1P25490 414 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 MTM1Q13496 603 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 DPYSQ14117 519 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 LRRC14Q15048 493 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 PAFAH1B3Q15102 231 aaKnown RBP20.18■□□□□ 0.82
FAM3A-215ENST00000447601 PDK1Q15118 436 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TPSAB1Q15661 275 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 FAXCQ5TGI0 409 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 BHLHA9Q7RTU4 235 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TAX1BP1Q86VP1 789 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 CACNA2D3Q8IZS8 1091 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 SLC43A3Q8NBI5 491 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 OR10T2Q8NGX3 314 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 LRRC39Q96DD0 335 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 SGSM3Q96HU1 749 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 SEC16BQ96JE7 1060 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 SMC6Q96SB8 1091 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 DHRS4Q9BTZ2 278 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TRABDQ9H4I3 376 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 TMPRSS4Q9NRS4 437 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 PCDHB8Q9UN66 801 aa20.18■□□□□ 0.82
FAM3A-215ENST00000447601 SMG5Q9UPR3 1016 aaKnown RBP20.18■□□□□ 0.82
FAM3A-215ENST00000447601 PPP1R12AO14974 1030 aaPredicted RBP20.17■□□□□ 0.82
FAM3A-215ENST00000447601 PRPF4O43172 522 aaKnown RBP eCLIP20.17■□□□□ 0.82
FAM3A-215ENST00000447601 ZNF135P52742 658 aaPredicted RBP20.17■□□□□ 0.82
FAM3A-215ENST00000447601 PKN2Q16513 984 aaKnown RBP20.17■□□□□ 0.82
FAM3A-215ENST00000447601 SYCP2LQ5T4T6 812 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 ADGRD1Q6QNK2 874 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 PDZD4Q76G19 769 aaPredicted RBP20.17■□□□□ 0.82
FAM3A-215ENST00000447601 YTHDF3Q7Z739 585 aaKnown RBP20.17■□□□□ 0.82
FAM3A-215ENST00000447601 ADAM32Q8TC27 787 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 URGCPQ8TCY9 931 aa20.17■□□□□ 0.82
FAM3A-215ENST00000447601 LRRN4Q8WUT4 740 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms