RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 HIP1O00291 1037 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NOP56O00567 594 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CDK2AP1O14519 115 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 XPO1O14980 1071 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SNPHO15079 494 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CLDN3O15551 220 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PRPF4O43172 522 aaKnown RBP eCLIP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PHGDHO43175 533 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 HNRNPRO43390 633 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CHMP2AO43633 222 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CCNT1O60563 726 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FKTNO75072 461 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PPP6R2O75170 966 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ATP6V1G1O75348 118 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 WBP4O75554 376 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CBR3O75828 277 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 DDNO94850 711 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CAMTA2O94983 1202 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SCAF4O95104 1147 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FTCDO95954 541 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TK1P04183 234 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KRT6BP04259 564 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NTRK1P04629 796 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 EIF2S1P05198 315 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FYNP06241 537 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ITGAVP06756 1048 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FHP07954 510 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ITGA5P08648 1049 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SUPT20HL2P0C7V6 817 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ZCCHC18P0CG32 403 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 THRBP10828 461 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SRCP12931 536 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 BMP1P13497 986 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 C6P13671 934 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MTHFD2P13995 350 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 AGXTP21549 392 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FGFR4P22455 802 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CALB2P22676 271 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CPN2P22792 545 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CES1P23141 567 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CTSSP25774 331 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PSMA5P28066 241 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PCSK1P29120 753 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TM4SF1P30408 202 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 LSP1P33241 339 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SPAM1P38567 509 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PAFAH1B1P43034 410 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ACADSBP45954 432 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GPR3P46089 330 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RABIFP47224 123 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 OR1G1P47890 313 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GRIA4P48058 902 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PCP4P48539 62 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KRT6CP48668 564 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PITPNBP48739 271 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CEBPAP49715 358 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KHKP50053 298 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GATMP50440 423 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ANXA11P50995 505 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MECP2P51608 486 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PPP5CP53041 499 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SLC5A3P53794 718 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SNU13P55769 128 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RIPK4P57078 832 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RPS8P62241 208 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 POLR2GP62487 172 aaKnown RBP eCLIP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TRA2BP62995 288 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PHC1P78364 1004 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ST5P78524 1137 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MRPS5P82675 430 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KIF23Q02241 960 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RPL6Q02878 288 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GAD2Q05329 585 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 DDR1Q08345 913 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 LGALS3BPQ08380 585 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CALCOCO2Q13137 446 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 DYRK1AQ13627 763 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RAPSNQ13702 412 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GAS6Q14393 721 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 DMC1Q14565 340 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NOLC1Q14978 699 aaKnown RBP eCLIP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 VEPH1Q14D04 833 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KARSQ15046 597 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PDK1Q15118 436 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TSC22D1Q15714 1073 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 USF2Q15853 346 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KCNA10Q16322 511 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MOGQ16653 247 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CYP2A13Q16696 494 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 UGP2Q16851 508 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ARHGAP44Q17R89 818 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FAM83EQ2M2I3 478 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF805Q5CZA5 627 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NHSL2Q5HYW2 709 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CFAP157Q5JU67 520 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 HABP4Q5JVS0 413 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SAPCD1Q5SSQ6 148 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RARS2Q5T160 578 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SLC9C2Q5TAH2 1124 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PRAMEF20Q5VT98 475 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms