RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 MPP2Q14168 576 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 RASA2Q15283 850 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 TRIM71Q2Q1W2 868 aaKnown RBP14.17□□□□□ -0.14
RBM39-216ENST00000444878 RAB41Q5JT25 222 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 FAM26DQ5JW98 314 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 FAXCQ5TGI0 409 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 GPRIN1Q7Z2K8 1008 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 RNF139Q8WU17 664 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 CABS1Q96KC9 395 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 QKIQ96PU8 341 aaKnown RBP eCLIP14.17□□□□□ -0.146e-25■■■□□ 16.5
RBM39-216ENST00000444878 ACBD6Q9BR61 282 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 FAM117AQ9C073 453 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 ACSS3Q9H6R3 686 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 ETNK1Q9HBU6 452 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 ARHGEF4Q9NR80 690 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 PIGVQ9NUD9 493 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 TMEM30AQ9NV96 361 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 SENP1Q9P0U3 644 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 FETUBQ9UGM5 382 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 SRRDQ9UH36 339 aa14.17□□□□□ -0.14
RBM39-216ENST00000444878 CREB3O43889 395 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 GCATO75600 419 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 FYNP06241 537 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 NCAM1P13591 858 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 HOXD10P28358 340 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 PKN2Q16513 984 aaKnown RBP14.16□□□□□ -0.14
RBM39-216ENST00000444878 ECHDC2Q86YB7 292 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 LRRC34Q8IZ02 419 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 TFB1MQ8WVM0 346 aaKnown RBP14.16□□□□□ -0.14
RBM39-216ENST00000444878 GLT1D1Q96MS3 346 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 RTP3Q9BQQ7 232 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 TRABDQ9H4I3 376 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 TMPRSS4Q9NRS4 437 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 DSEQ9UL01 958 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 TEX264Q9Y6I9 313 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 SQORQ9Y6N5 450 aa14.16□□□□□ -0.14
RBM39-216ENST00000444878 ATXN2Q99700 1313 aaKnown RBP14.16□□□□□ -0.14
RBM39-216ENST00000444878 FAM47DPA6NHR8 397 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 LTFP02788 710 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 CYP11A1P05108 521 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 STX2P32856 288 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 IFT88Q13099 833 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 EFTUD2Q15029 972 aaKnown RBP eCLIP14.15□□□□□ -0.141e-13■■■□□ 18
RBM39-216ENST00000444878 INTS6LQ5JSJ4 861 aaKnown RBP14.15□□□□□ -0.14
RBM39-216ENST00000444878 GDAP1Q8TB36 358 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 MICAL1Q8TDZ2 1067 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 UROC1Q96N76 676 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 SMC6Q96SB8 1091 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 SLC9A7Q96T83 725 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 RHOBTB2Q9BYZ6 727 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 NSRP1Q9H0G5 558 aaKnown RBP14.15□□□□□ -0.14
RBM39-216ENST00000444878 MFHAS1Q9Y4C4 1052 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 TTC3P53804 2025 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 SHROOM3Q8TF72 1996 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 HACD1B0YJ81 288 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 C9IYK1 514 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 M0QZQ0 153 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 AVILO75366 819 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 BDNFP23560 247 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 PAX3P23760 479 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 YY1P25490 414 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 MSH2P43246 934 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 MAGEA6P43360 314 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 YWHAGP61981 247 aaKnown RBP eCLIP14.15□□□□□ -0.14
RBM39-216ENST00000444878 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 FAM171BQ6P995 826 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 IGDCC3Q8IVU1 814 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 HTR3CQ8WXA8 447 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 OLFM3Q96PB7 478 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 PAFAH2Q99487 392 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 SAMD15Q9P1V8 674 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 FRMPD3Q5JV73 1810 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 NLRC5Q86WI3 1866 aa14.15□□□□□ -0.14
RBM39-216ENST00000444878 HHLA1C9JL84 531 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 EEF2KO00418 725 aaKnown RBP14.14□□□□□ -0.15
RBM39-216ENST00000444878 MFSD11O43934 449 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 SPAG7O75391 227 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 SPAG6O75602 509 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 DGKIO75912 1065 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 PIAS1O75925 651 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 CKBP12277 381 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 ADRA1BP35368 520 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 AIF1P55008 147 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 OVOS1Q6IE37 1185 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 CD300LGQ6UXG3 332 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 CTU1Q7Z7A3 348 aaKnown RBP14.14□□□□□ -0.15
RBM39-216ENST00000444878 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
RBM39-216ENST00000444878 THEM5Q8N1Q8 247 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 CD99L2Q8TCZ2 262 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 RAET1EQ8TD07 263 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 CKAP2Q8WWK9 683 aa14.14□□□□□ -0.15
RBM39-216ENST00000444878 RSPH1Q8WYR4 309 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms