RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TRIM69Q86WT6 500 aa11.52□□□□□ -0.56
FN1-211ENST00000443816 DTNBP1Q96EV8 351 aa11.52□□□□□ -0.56
FN1-211ENST00000443816 C9orf72Q96LT7 481 aa11.52□□□□□ -0.56
FN1-211ENST00000443816 THUMPD3Q9BV44 507 aaKnown RBP11.52□□□□□ -0.56
FN1-211ENST00000443816 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.568e-6■□□□□ 10.8
FN1-211ENST00000443816 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.56
FN1-211ENST00000443816 ATP13A1Q9HD20 1204 aa11.52□□□□□ -0.56
FN1-211ENST00000443816 SMIM22K7EJ46 135 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 GYPCP04921 128 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 SMIM10L2AP0DMW4 78 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 SMIM10L2BP0DMW5 78 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 XRCC4Q13426 336 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 ATAD3BQ5T9A4 648 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 LGI2Q8N0V4 545 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 CXorf40AQ8TE69 158 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 FICDQ9BVA6 458 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 MARCH2Q9P0N8 246 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 PDZK1P1A8MUH7 402 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 PGS1Q32NB8 556 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 MCOLN3Q8TDD5 553 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 CYGBQ8WWM9 190 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 E2F7Q96AV8 911 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 KBTBD4Q9NVX7 518 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 SMPD4Q9NXE4 827 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 SEPT3Q9UH03 358 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 NCF1BA6NI72 391 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 NCF1CA8MVU1 366 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 F8VZ95 297 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 AIM2O14862 343 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 APOA1P02647 267 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 NCF1P14598 390 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 GSTA3Q16772 222 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 ARMC12Q5T9G4 340 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 PRPF39Q86UA1 669 aaKnown RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 SLC13A5Q86YT5 568 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 SPACA7Q96KW9 195 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 TMCC3Q9ULS5 477 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 CHKAP35790 457 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 MCL1Q07820 350 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 CYLC2Q14093 348 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 DNAJC1Q96KC8 554 aaKnown RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 JCHAINP01591 159 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 MLH1P40692 756 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 HECTD3Q5T447 861 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 CYP20A1Q6UW02 462 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 ILDR2Q71H61 639 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 STK40Q8N2I9 435 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 TUBGCP3Q96CW5 907 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 SENP8Q96LD8 212 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 GANQ9H2C0 597 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 UBA2Q9UBT2 640 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 MARCOQ9UEW3 520 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 NDOR1Q9UHB4 597 aa11.52□□□□□ -0.57
FN1-211ENST00000443816 PNMA8BQ9ULN7 279 aaPredicted RBP11.52□□□□□ -0.57
FN1-211ENST00000443816 ADH1CP00326 375 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 C21orf59P57076 290 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 ZNF268Q14587 947 aaPredicted RBP11.51□□□□□ -0.57
FN1-211ENST00000443816 PNMA5Q96PV4 448 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 ELOVL6Q9H5J4 265 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 IARS2Q9NSE4 1012 aaKnown RBP11.51□□□□□ -0.57
FN1-211ENST00000443816 MYH4Q9Y623 1939 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 IRF6O14896 467 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 FGF10O15520 208 aaPredicted RBP11.51□□□□□ -0.57
FN1-211ENST00000443816 GUCY1B2O75343 617 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 FAM118BQ9BPY3 351 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 ZSWIM1Q9BR11 485 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 PORCNQ9H237 461 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 CTNNAL1Q9UBT7 734 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 DISP2A7MBM2 1401 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 MPOP05164 745 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 CCDC130P13994 396 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 FXR1P51114 621 aaKnown RBP eCLIP11.51□□□□□ -0.57
FN1-211ENST00000443816 TMED1Q13445 227 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 SAE1Q9UBE0 346 aaPredicted RBP11.51□□□□□ -0.57
FN1-211ENST00000443816 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 HACD1B0YJ81 288 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 GNA13Q14344 377 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 GAD1Q99259 594 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 INTS13Q9NVM9 706 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 SLCO1B7G3V0H7 640 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 CHN1P15882 459 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 S100A5P33763 92 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 SLC12A3P55017 1021 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 PLD3Q8IV08 490 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 EME1Q96AY2 570 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
FN1-211ENST00000443816 OLFM3Q96PB7 478 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 ADAM21Q9UKJ8 722 aa11.51□□□□□ -0.57
FN1-211ENST00000443816 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms