RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 GON4LQ3T8J9 2241 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 SPAG17Q6Q759 2223 aa9.18□□□□□ -0.94
USP6NL-203ENST00000443016 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 ANTXRLA6NF34 631 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 HOXC11O43248 304 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 ZBED1O96006 694 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TYRP14679 529 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 ZNF18P17022 549 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 YWHAGP61981 247 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 CSRP2Q16527 193 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 QPCTQ16769 361 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 EOGTQ5NDL2 527 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 C10orf76Q5T2E6 689 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 EMC10Q5UCC4 262 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 SCD5Q86SK9 330 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 SIX6OS1Q8N1H7 587 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 PGBD3Q8N328 593 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 ZNF513Q8N8E2 541 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 C12orf50Q8NA57 414 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 IL17RCQ8NAC3 791 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 MED15Q96RN5 788 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 UBXN6Q9BZV1 441 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 POLMQ9NP87 494 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 SAMSN1Q9NSI8 373 aaKnown RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 DLL3Q9NYJ7 618 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 WDR35Q9P2L0 1181 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 KIAA1257Q9ULG3 409 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 INVSQ9Y283 1065 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 PCDHB4Q9Y5E5 795 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 XPO1O14980 1071 aaKnown RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 DCLK1O15075 740 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 ZBTB24O43167 697 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 FOXD2O60548 495 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 VDRP11473 427 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TGM1P22735 817 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TNFRSF4P43489 277 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TBX4P57082 545 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 BST2Q10589 180 aaKnown RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 CCDC6Q16204 474 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 HSF5Q4G112 596 aaPredicted RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 HSP90AA4PQ58FG1 418 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TCP11X2Q5H9J9 407 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 GRAMD4Q6IC98 578 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 SARM1Q6SZW1 724 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 PRR23CQ6ZRP0 262 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TRMT11Q7Z4G4 463 aaKnown RBP9.17□□□□□ -0.94
USP6NL-203ENST00000443016 TERB1Q8NA31 727 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 UBA3Q8TBC4 463 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 ALG2Q9H553 416 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 PLK2Q9NYY3 685 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 MARCH2Q9P0N8 246 aa9.17□□□□□ -0.94
USP6NL-203ENST00000443016 SGK1O00141 431 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 TULP2O00295 520 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 TRIM24O15164 1050 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 RHOBTB1O94844 696 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 CHKAP35790 457 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 CREB5Q02930 508 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 ADIGQ0VDE8 80 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 KCNH2Q12809 1159 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 AASDHQ4L235 1098 aaPredicted RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 RRAGAQ7L523 313 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 ETFBKMTQ8IXQ9 262 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 CHPFQ8IZ52 775 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 MDGA1Q8NFP4 955 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 RNF139Q8WU17 664 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 HMGB4Q8WW32 186 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 LOXL4Q96JB6 756 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 ULBP1Q9BZM6 244 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 DCLK3Q9C098 648 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 CUEDC1Q9NWM3 386 aaPredicted RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 ZNF510Q9Y2H8 683 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 A0A0A0MRY4 1105 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 SLC12A8A0AV02 714 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 PES1O00541 588 aaKnown RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 P4HA2O15460 535 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 STC2O76061 302 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 AFPP02771 609 aaKnown RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 SETSIPP0DME0 302 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 KIR2DL1P43626 348 aaPredicted RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 DGKGP49619 791 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 FANCCQ00597 558 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 PLK5Q496M5 336 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 RAB41Q5JT25 222 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 TMEM92Q6UXU6 159 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 DENND1CQ8IV53 801 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 LIMA1Q9UHB6 759 aaKnown RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
USP6NL-203ENST00000443016 MYO16Q9Y6X6 1858 aa9.16□□□□□ -0.94
USP6NL-203ENST00000443016 TCRBV21S2A2A0A5A6 115 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 M0QYV0 167 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 O00370 1275 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 MAP3K13O43283 966 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 CACNG3O60359 315 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 GREM1O60565 184 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 CYBBP04839 570 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 PAEPP09466 180 aa9.15□□□□□ -0.94
USP6NL-203ENST00000443016 LCP1P13796 627 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms