RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 MARK4Q96L34 752 aa16.07■□□□□ 0.16
CDH23-207ENST00000442677 CITED4Q96RK1 184 aa16.07■□□□□ 0.16
CDH23-207ENST00000442677 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
CDH23-207ENST00000442677 WDR62O43379 1518 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 DCXO43602 365 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ADSLP30566 484 aaPredicted RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 CDH18Q13634 790 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ERO1BQ86YB8 467 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SETD9Q8NE22 299 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 ELOVL6Q9H5J4 265 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ANKZF1Q9H8Y5 726 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 UBA2Q9UBT2 640 aaPredicted RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 WBP11Q9Y2W2 641 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 RIPK2O43353 540 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 STARD3Q14849 445 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 PKN1Q16512 942 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SDE2Q6IQ49 451 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SLC26A11Q86WA9 606 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 OR7A2PQ8NGA2 310 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ITFG1Q8TB96 612 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 FNIP1Q8TF40 1166 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 OSGEPQ9NPF4 335 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 TRMT13Q9NUP7 481 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 CLIC5Q9NZA1 410 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SIK3Q9Y2K2 1263 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 RAD54BQ9Y620 910 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ETS2P15036 469 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ZDHHC13Q8IUH4 622 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 TUBE1Q9UJT0 475 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SF3B1O75533 1304 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDH23-207ENST00000442677 S100A6P06703 90 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 PABPC1P11940 636 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 MPP3Q13368 585 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 CLPBQ9H078 707 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 PIK3CDO00329 1044 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 PSIP1O75475 530 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 NPTXRO95502 500 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 DBTP11182 482 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 VAV1P15498 845 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 GTF2E2P29084 291 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 GSTM5P46439 218 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 DALRD3Q5D0E6 543 aaKnown RBP16.06■□□□□ 0.16
CDH23-207ENST00000442677 PRMT9Q6P2P2 845 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 CCDC80Q76M96 950 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 DSEQ9UL01 958 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 CNTFP26441 200 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 SNX32Q86XE0 403 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 ZMYM5Q9UJ78 669 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 LYVE1Q9Y5Y7 322 aa16.06■□□□□ 0.16
CDH23-207ENST00000442677 FOXN3O00409 490 aaPredicted RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 C2CD2LO14523 706 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 EIF3DO15371 548 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDH23-207ENST00000442677 SEC24AO95486 1093 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 FAM86B2P0C5J1 330 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 PRKCEQ02156 737 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 CUL2Q13617 745 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 PCDHGA4Q9Y5G9 962 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 BCLAF3A2AJT9 711 aaKnown RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 PSMG1O95456 288 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 ZFP1Q6P2D0 407 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 UGT2B28Q9BY64 529 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 CEP41Q9BYV8 373 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 RCVRNP35243 200 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 RAP1GAPP47736 663 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 CASP5P51878 434 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 POU5F1Q01860 360 aaKnown RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 QPRTQ15274 297 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 XKR3Q5GH77 459 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 ZCCHC8Q6NZY4 707 aaKnown RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 ITGA4P13612 1032 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 PPP2R1BP30154 601 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 IFI35P80217 286 aaPredicted RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 RBM44Q6ZP01 1051 aaKnown RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 ZNF438Q7Z4V0 828 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 SLC22A9Q8IVM8 553 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 ACTR8Q9H981 624 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 FAM25EA8MYX2 175 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 MPOP05164 745 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 ME2P23368 584 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 ZNF177Q13360 481 aaPredicted RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 CCSAPQ6IQ19 270 aaPredicted RBP16.05■□□□□ 0.16
CDH23-207ENST00000442677 FRMD6Q96NE9 622 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 CMTM6Q9NX76 183 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 ACOT9Q9Y305 439 aa16.05■□□□□ 0.16
CDH23-207ENST00000442677 RXRBP28702 533 aa16.04■□□□□ 0.16
CDH23-207ENST00000442677 PSMD4P55036 377 aaKnown RBP16.04■□□□□ 0.16
CDH23-207ENST00000442677 SCARF1Q14162 830 aa16.04■□□□□ 0.16
CDH23-207ENST00000442677 ALX1Q15699 326 aa16.04■□□□□ 0.16
CDH23-207ENST00000442677 KLHL32Q96NJ5 620 aa16.04■□□□□ 0.16
CDH23-207ENST00000442677 EFR3BQ9Y2G0 817 aa16.04■□□□□ 0.16
CDH23-207ENST00000442677 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
CDH23-207ENST00000442677 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms