RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CHI3L2Q15782 390 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 LRRC26Q2I0M4 334 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 KBTBD12Q3ZCT8 623 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 LRRC38Q5VT99 294 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 TXNRD3NBQ6F5E7 133 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 KLC3Q6P597 504 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 FBXL19Q6PCT2 694 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 ARPINQ7Z6K5 226 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CRLF3Q8IUI8 442 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 SH2D3AQ9BRG2 576 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 GPRC5CQ9NQ84 441 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 XPO7Q9UIA9 1087 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 A0A0J9YVX5 310 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 TCRBV9S1A1TA0A576 114 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CCNT2O60583 730 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 ZC3H11AO75152 810 aaKnown RBP eCLIP8.86□□□□□ -0.99
HPS4-206ENST00000439453 ATP5BP06576 529 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 MYCLP12524 364 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 KCNA2P16389 499 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CDKN2BP42772 138 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 RPL5P46777 297 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 NCKAP1LP55160 1127 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 PSMC5P62195 406 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 FOLH1Q04609 750 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 TBL3Q12788 808 aaKnown RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 TRIP10Q15642 601 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 USP37Q86T82 979 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 CATSPER2Q96P56 530 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 SAE1Q9UBE0 346 aaPredicted RBP8.86□□□□□ -0.99
HPS4-206ENST00000439453 TBX20Q9UMR3 447 aa8.86□□□□□ -0.99
HPS4-206ENST00000439453 A0A1W2PQ45 241 aaPredicted RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 A0A1W2PQY0 241 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 TRIM49D1C9J1S8 452 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 STK10O94804 968 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 FAM163BP0C2L3 166 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 AOC1P19801 751 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 ELK3P41970 407 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 C1QBPQ07021 282 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 KCNA10Q16322 511 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 TEX44Q53QW1 395 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 KLHDC10Q6PID8 442 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 BTBD9Q96Q07 612 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 USP29Q9HBJ7 922 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 PKD2L1Q9P0L9 805 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 PLLPQ9Y342 182 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 HBS1LQ9Y450 684 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 TMEM191CA6NGB0 347 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 F8VP50 259 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 P4HBP07237 508 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 TMEM191BP0C7N4 346 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 EPHB1P54762 984 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 DYNLT1P63172 113 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 OTUD4Q01804 1114 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 ZNF252P-AS1Q0IIN9 211 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 RALGPS1Q5JS13 557 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 TTC39BQ5VTQ0 682 aaPredicted RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 NUDCD3Q8IVD9 361 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 ICA1LQ8NDH6 482 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 RSAD2Q8WXG1 361 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 EBF4Q9BQW3 602 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 C11orf49Q9H6J7 331 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 SSX2IPQ9Y2D8 614 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 KAT6AQ92794 2004 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 SDR42E2A6NKP2 422 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 ATP6V1G1O75348 118 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 STAM2O75886 525 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 TFAP2AP05549 437 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 YWHAGP61981 247 aaKnown RBP eCLIP8.85□□□□□ -0.99
HPS4-206ENST00000439453 DBN1Q16643 649 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 WDR44Q5JSH3 913 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 XRRA1Q6P2D8 792 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 C1orf228Q6PIY5 440 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 SLC43A3Q8NBI5 491 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 ACTL9Q8TC94 416 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 IRGQQ8WZA9 623 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 JADE3Q92613 823 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 FBXL18Q96ME1 805 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 RIT2Q99578 217 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 TSEN34Q9BSV6 310 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 EHMT1Q9H9B1 1298 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 DDX18Q9NVP1 670 aaKnown RBP8.85□□□□□ -0.99
HPS4-206ENST00000439453 SIRPGQ9P1W8 387 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 BLOC1S6Q9UL45 172 aa8.85□□□□□ -0.99
HPS4-206ENST00000439453 PDE4DIPQ5VU43 2346 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 KBTBD13C9JR72 458 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 FAM155BO75949 473 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 PDE5AO76074 875 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 SORBS2O94875 1100 aaKnown RBP8.84□□□□□ -0.99
HPS4-206ENST00000439453 CLPTM1O96005 669 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 WEE2P0C1S8 567 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 TXNP10599 105 aaKnown RBP8.84□□□□□ -0.99
HPS4-206ENST00000439453 RAG1P15918 1043 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 GNA15P30679 374 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 SERPINB6P35237 376 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 ACLYP53396 1101 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 IRX4P78413 519 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
HPS4-206ENST00000439453 GRAMD1BQ3KR37 738 aa8.84□□□□□ -0.99
HPS4-206ENST00000439453 BRDTQ58F21 947 aaPredicted RBP8.84□□□□□ -0.99
HPS4-206ENST00000439453 TMC7Q7Z402 723 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms