RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 POU6F2P78424 691 aaPredicted RBP6.89□□□□□ -1.31
SPEN-202ENST00000438066 CUL4BQ13620 913 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 TRIM29Q14134 588 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 PKN1Q16512 942 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 AGAP9Q5VTM2 703 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 CRTC1Q6UUV9 634 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 ZDHHC24Q6UX98 284 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 HERC6Q8IVU3 1022 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 SLC44A5Q8NCS7 719 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 ENGASEQ8NFI3 743 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 BICD2Q8TD16 824 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 KCNG4Q8TDN1 519 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 CFHR4Q92496 578 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 GCDHQ92947 438 aaPredicted RBP6.89□□□□□ -1.31
SPEN-202ENST00000438066 EID2BQ96D98 161 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 RRP36Q96EU6 259 aaKnown RBP6.89□□□□□ -1.31
SPEN-202ENST00000438066 CEP95Q96GE4 821 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 KCNC2Q96PR1 638 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 PPP1R9BQ96SB3 815 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 PCDHAC1Q9H158 963 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 GOLPH3LQ9H4A5 285 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 TMEM8AQ9HCN3 771 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 TCP11L1Q9NUJ3 509 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 IRAK4Q9NWZ3 460 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 HERC5Q9UII4 1024 aaKnown RBP6.89□□□□□ -1.31
SPEN-202ENST00000438066 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 HS3ST4Q9Y661 456 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 CLIC4Q9Y696 253 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
SPEN-202ENST00000438066 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 MTSS1O43312 755 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 GFPT2O94808 682 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 RRM1P23921 792 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 SLC6A4P31645 630 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 MEOX1P50221 254 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 PAPOLAP51003 745 aaKnown RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 PNLIPRP1P54315 467 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 NR1H2P55055 460 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 TFAP4Q01664 338 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 CCDC173Q0VFZ6 552 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 TOP3AQ13472 1001 aaPredicted RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 ACAP1Q15027 740 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 PTPAQ15257 358 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 DLGAP5Q15398 846 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 SLC45A4Q5BKX6 768 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 TMTC4Q5T4D3 741 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 RAP1GAP2Q684P5 730 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 OLFML2BQ68BL8 750 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 TRIM68Q6AZZ1 485 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 ADALQ6DHV7 355 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 TRMT10BQ6PF06 316 aaKnown RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 LARP4Q71RC2 724 aaKnown RBP eCLIP6.88□□□□□ -1.31
SPEN-202ENST00000438066 TP53INP2Q8IXH6 220 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 UCMAQ8WVF2 138 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 PDLIM2Q96JY6 352 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 C11orf84Q9BUA3 381 aaPredicted RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 MXD3Q9BW11 206 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 MS4A7Q9GZW8 240 aaPredicted RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 FOXP1Q9H334 677 aaPredicted RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 ZMYND8Q9ULU4 1186 aaPredicted RBP6.88□□□□□ -1.31
SPEN-202ENST00000438066 PCDHA7Q9UN72 937 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 COL4A5P29400 1685 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 ARFGEF1Q9Y6D6 1849 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 FER1L6Q2WGJ9 1857 aa6.88□□□□□ -1.31
SPEN-202ENST00000438066 K7ENM7 598 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 SPTLC2O15270 562 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 FAM155BO75949 473 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 EGR1P18146 543 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 BTF3P20290 206 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 CST5P28325 142 aaPredicted RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 ME1P48163 572 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 NOVP48745 357 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 MLLT6P55198 1093 aaPredicted RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 GABPAQ06546 454 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 KIAA2012Q0VF49 1180 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 TRPC3Q13507 836 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 SLC39A14Q15043 492 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 STK38Q15208 465 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 NPY5RQ15761 445 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 MAPKAPK3Q16644 382 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 CRB2Q5IJ48 1285 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 STRIP1Q5VSL9 837 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 ARL6IP4Q66PJ3 421 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 APOBEC3HQ6NTF7 200 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 KIAA0408Q6ZU52 694 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 DEFB132Q7Z7B7 95 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 DIS3L2Q8IYB7 885 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 SRBD1Q8N5C6 995 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 CTCFLQ8NI51 663 aaPredicted RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 TNMDQ9H2S6 317 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 TAF1DQ9H5J8 278 aaPredicted RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 DBNDD1Q9H9R9 158 aa6.87□□□□□ -1.31
SPEN-202ENST00000438066 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 DDX4Q9NQI0 724 aaKnown RBP6.87□□□□□ -1.31
SPEN-202ENST00000438066 KCNJ14Q9UNX9 436 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms