RNA–Protein interactions for RNA: ENST00000434703.5

SOX9-AS1-204, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 3,032 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-204ENST00000434703 PGAP3Q96FM1 320 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RUFY1Q96T51 708 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SEPT5Q99719 369 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SH3GL2Q99962 352 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MED4Q9NPJ6 270 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ARHGEF4Q9NR80 690 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SFMBT1Q9UHJ3 866 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MYO16Q9Y6X6 1858 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ABHD14A-ACY1A0A1B0GW23 586 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 DNALI1O14645 258 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 EFEMP2O95967 443 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SHBGP04278 402 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TGM2P21980 687 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RFC2P35250 354 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 WDR5P61964 334 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 GAD2Q05329 585 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 DUSP4Q13115 394 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 GPR17Q13304 367 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MTMR3Q13615 1198 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MGAT5BQ3V5L5 792 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 EFHC2Q5JST6 749 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ANKS3Q6ZW76 656 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 NUP93Q8N1F7 819 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CASP10Q92851 521 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 IGSF21Q96ID5 467 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TKTL2Q9H0I9 626 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 USP29Q9HBJ7 922 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 VPS18Q9P253 973 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 LTBP2Q14767 1821 aa10.24□□□□□ -0.77
SOX9-AS1-204ENST00000434703 COL4A4P53420 1690 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 KIAA0355O15063 1070 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RBL1P28749 1068 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MAGEA11P43364 429 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CXCR3P49682 368 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ZNF844Q08AG5 666 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TTMPQ5BVD1 217 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CEP85LQ5SZL2 805 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 KCNT2Q6UVM3 1135 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 OTOP2Q7RTS6 562 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 PSTKQ8IV42 348 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TP53INP2Q8IXH6 220 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SLC9A7Q96T83 725 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 PABPC3Q9H361 631 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 WDCPQ9H6R7 721 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 GMIPQ9P107 970 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MFSD11O43934 449 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 HSPA1AP0DMV8 641 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 HSPA1BP0DMV9 641 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SLC29A2Q14542 456 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SYCP2LQ5T4T6 812 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RNASEH2BQ5TBB1 312 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ANKRD22Q5VYY1 191 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RNF34Q969K3 372 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 NTAN1Q96AB6 310 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ZNF689Q96CS4 500 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RC3H2Q9HBD1 1191 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RRN3Q9NYV6 651 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 DTLQ9NZJ0 730 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TPX2Q9ULW0 747 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 WDR27A2RRH5 827 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 H3BRJ5 948 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 GOLGA8MH3BSY2 632 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 H7C4K7 107 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 EEF2KO00418 725 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TRIM66O15016 1216 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 KCNN4O15554 427 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 F9P00740 461 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 IGLV3-25P01717 112 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RARGP13631 454 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 OR1D2P34982 312 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CTCFP49711 727 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SCAPQ12770 1279 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 DPYSQ14117 519 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MFSD5Q6N075 450 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RFX8Q6ZV50 586 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 RNF168Q8IYW5 571 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CCHCR1Q8TD31 782 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 GIPC2Q8TF65 315 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 FAM129AQ9BZQ8 928 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CDC42EP4Q9H3Q1 356 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 ABCC13Q9NSE7 274 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SCML2Q9UQR0 700 aa10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MRPL42Q9Y6G3 142 aaKnown RBP10.23□□□□□ -0.77
SOX9-AS1-204ENST00000434703 TCRBV7S3A2A0A539 114 aa10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 IRAK2O43187 625 aa10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 CAV1Q03135 178 aa10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 SEMA3BQ13214 749 aa10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 MTM1Q13496 603 aa10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 EIF4EBP2Q13542 120 aaPredicted RBP10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 BTG3Q14201 252 aaPredicted RBP10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 PSMD5Q16401 504 aa10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 HP1BP3Q5SSJ5 553 aaPredicted RBP10.22□□□□□ -0.77
SOX9-AS1-204ENST00000434703 KCTD16Q68DU8 428 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 490.2 ms