RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 SPAG1Q07617 926 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 STRN3Q13033 797 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 DHX8Q14562 1220 aaKnown RBP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 TMEM119Q4V9L6 283 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 HYIQ5T013 277 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 CEP68Q76N32 757 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 SYT2Q8N9I0 419 aaPredicted RBP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 FBXO15Q8NCQ5 510 aaPredicted RBP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 TMEM161BQ8NDZ6 487 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 LRRC15Q8TF66 581 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 FGF13Q92913 245 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 FGF14Q92915 247 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 KISS1RQ969F8 398 aaPredicted RBP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 CHAMP1Q96JM3 812 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 DHRS4Q9BTZ2 278 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 IRF2BPLQ9H1B7 796 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 TBC1D17Q9HA65 648 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 C17orf75Q9HAS0 396 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 GPR27Q9NS67 375 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 SLC38A7Q9NVC3 462 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 WNT16Q9UBV4 365 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 TUBGCP4Q9UGJ1 667 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 SMC3Q9UQE7 1217 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 NOTCH4Q99466 2003 aa10.77□□□□□ -0.68
LINC01090-202ENST00000434418 USP34Q70CQ2 3546 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 TOM1L1O75674 476 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 CYBBP04839 570 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 CXCL8P10145 99 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 KCNE1P15382 129 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 HOXA9P31269 272 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 YBX1P67809 324 aaKnown RBP10.77□□□□□ -0.69
LINC01090-202ENST00000434418 ROR1Q01973 937 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 GRIN1Q05586 938 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 SQSTM1Q13501 440 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 LONRF2Q1L5Z9 754 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 SLC5A9Q2M3M2 681 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 PABPC1LQ4VXU2 614 aaKnown RBP10.77□□□□□ -0.69
LINC01090-202ENST00000434418 SPECC1Q5M775 1068 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 PAQR3Q6TCH7 311 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 ASCL5Q7RTU5 278 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 TMC6Q7Z403 805 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 FRMD5Q7Z6J6 570 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 CCDC105Q8IYK2 499 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 BICD1Q96G01 975 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 KXD1Q9BQD3 176 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 TIPINQ9BVW5 301 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 SGPP1Q9BX95 441 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.69
LINC01090-202ENST00000434418 ARHGEF3Q9NR81 526 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 DNMT3BQ9UBC3 853 aaKnown RBP10.77□□□□□ -0.69
LINC01090-202ENST00000434418 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
LINC01090-202ENST00000434418 ZFHX2Q9C0A1 2572 aaPredicted RBP10.76□□□□□ -0.69
LINC01090-202ENST00000434418 WDR27A2RRH5 827 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 PRRG1O14668 218 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 DCNP07585 359 aaKnown RBP10.76□□□□□ -0.69
LINC01090-202ENST00000434418 TNFSF9P41273 254 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 GPC5P78333 572 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
LINC01090-202ENST00000434418 ANGPT1Q15389 498 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 ZBTB41Q5SVQ8 909 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 ARL6IP4Q66PJ3 421 aaKnown RBP10.76□□□□□ -0.69
LINC01090-202ENST00000434418 GPBP1Q86WP2 473 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 Q8N1Y9 231 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 POU5F2Q8N7G0 328 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 ZSWIM2Q8NEG5 633 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 RASSF8Q8NHQ8 419 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 IPO9Q96P70 1041 aaKnown RBP10.76□□□□□ -0.69
LINC01090-202ENST00000434418 REEP2Q9BRK0 252 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 NTPCRQ9BSD7 190 aaKnown RBP10.76□□□□□ -0.69
LINC01090-202ENST00000434418 FBXL5Q9UKA1 691 aa10.76□□□□□ -0.69
LINC01090-202ENST00000434418 PRR23AA6NEV1 266 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 K7ENM7 598 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 CLDN3O15551 220 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 SEC24AO95486 1093 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 RHOP08100 348 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 UBA7P41226 1012 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 NBL1P41271 181 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 MCL1Q07820 350 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 LSAMPQ13449 338 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 KARSQ15046 597 aaKnown RBP10.75□□□□□ -0.69
LINC01090-202ENST00000434418 CTXN3Q4LDR2 81 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 SLC8B1Q6J4K2 584 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 SYDE1Q6ZW31 735 aaPredicted RBP10.75□□□□□ -0.69
LINC01090-202ENST00000434418 HAUS6Q7Z4H7 955 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 MCRS1Q96EZ8 462 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 TRMT2BQ96GJ1 504 aaKnown RBP10.75□□□□□ -0.69
LINC01090-202ENST00000434418 RTP3Q9BQQ7 232 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 CYP4F11Q9HBI6 524 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 SLC2A4RGQ9NR83 387 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 KCND2Q9NZV8 630 aa10.75□□□□□ -0.69
LINC01090-202ENST00000434418 LARSQ9P2J5 1176 aaKnown RBP10.75□□□□□ -0.69
LINC01090-202ENST00000434418 ZFP37Q9Y6Q3 630 aaPredicted RBP10.75□□□□□ -0.69
LINC01090-202ENST00000434418 VPS37CA5D8V6 355 aaPredicted RBP10.74□□□□□ -0.69
LINC01090-202ENST00000434418 PROB1E7EW31 1015 aa10.74□□□□□ -0.69
LINC01090-202ENST00000434418 HNRNPDLO14979 420 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms