RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 THRAP3Q9Y2W1 955 aaKnown RBP4.45□□□□□ -1.7
PTPN4-205ENST00000433888 F8W810 466 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 SPTLC2O15270 562 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 USP12O75317 370 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 MT-ND5P03915 603 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 HRGP04196 525 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 NGFRP08138 427 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 DUSP1P28562 367 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 HOXD12P35452 270 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 PBX1P40424 430 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 POLD2P49005 469 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF84P51523 738 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 PGGT1BP53609 377 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 MTA1Q13330 715 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 MINDY4Q4G0A6 757 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 FAM102BQ5T8I3 360 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 Q6ZTC4 211 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 DCP1BQ8IZD4 617 aaKnown RBP4.44□□□□□ -1.7
PTPN4-205ENST00000433888 FSTL5Q8N475 847 aaPredicted RBP4.44□□□□□ -1.7
PTPN4-205ENST00000433888 FAM156AQ8NDB6 213 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF287Q9HBT7 754 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 PAPOLBQ9NRJ5 636 aaKnown RBP4.44□□□□□ -1.7
PTPN4-205ENST00000433888 AGO2Q9UKV8 859 aaKnown RBP4.44□□□□□ -1.7
PTPN4-205ENST00000433888 OGDHLQ9ULD0 1010 aa4.44□□□□□ -1.7
PTPN4-205ENST00000433888 MAP4K4O95819 1239 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 U2AF1L5P0DN76 240 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 DGKQP52824 942 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 U2AF1Q01081 240 aaKnown RBP eCLIP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 INPP5JQ15735 1006 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 CNGA3Q16281 694 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 P3H2Q8IVL5 708 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 IPCEF1Q8WWN9 437 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 CELF1Q92879 486 aaKnown RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 GJA10Q969M2 543 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 WDR24Q96S15 920 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 RNF26Q9BY78 433 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 RXFP3Q9NSD7 469 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 DDX20Q9UHI6 824 aaKnown RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 NOB1Q9ULX3 412 aaKnown RBP4.43□□□□□ -1.7
PTPN4-205ENST00000433888 SPATA31A5Q5VU36 1347 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 SPATA31A7Q8IWB4 1347 aa4.43□□□□□ -1.7
PTPN4-205ENST00000433888 hCG_2014768A0A024R1R8 64 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 A0A087WZ62 844 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 LACTBL1A8MY62 500 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 F8W8V4 182 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPN4-205ENST00000433888 SYF2O95926 243 aaKnown RBP4.42□□□□□ -1.7
PTPN4-205ENST00000433888 TFEBP19484 476 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 TBXAS1P24557 533 aaPredicted RBP4.42□□□□□ -1.7
PTPN4-205ENST00000433888 TNFRSF8P28908 595 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 P2RX3P56373 397 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 ANAPC15P60006 121 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 HYAL1Q12794 435 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 ASPHD1Q5U4P2 390 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 FAM90A2PQ658T7 463 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 B4GALNT4Q76KP1 1039 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 CHST15Q7LFX5 561 aaPredicted RBP4.42□□□□□ -1.7
PTPN4-205ENST00000433888 TCEAL8Q8IYN2 117 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 SDR16C5Q8N3Y7 309 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 SNX22Q96L94 193 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 SENP7Q9BQF6 1050 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 TMEM204Q9BSN7 226 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 FAM204AQ9H8W3 233 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 THSD1Q9NS62 852 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF212Q9UDV6 495 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 VPS4AQ9UN37 437 aa4.42□□□□□ -1.7
PTPN4-205ENST00000433888 KIR2DS5A0A0G2JLQ3 304 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ANKRD62A6NC57 917 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 KIR2DS3K7RE56 304 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 GOLIM4O00461 696 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 UGDHO60701 494 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 IL18RAPO95256 599 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ZBED1O96006 694 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 VPS41P49754 854 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 NUGGCQ68CJ6 796 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 NXNQ6DKJ4 435 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 KRT28Q7Z3Y7 464 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 UEVLDQ8IX04 471 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ARL14EPQ8N8R7 260 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-205ENST00000433888 AKAP1Q92667 903 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF845Q96IR2 970 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ARHGAP39Q9C0H5 1083 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 SLC25A32Q9H2D1 315 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ASNSD1Q9NWL6 643 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 ICKQ9UPZ9 632 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 PCDHB2Q9Y5E7 798 aa4.41□□□□□ -1.7
PTPN4-205ENST00000433888 TPP1O14773 563 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 ARP10275 920 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 MT3P25713 68 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 NDUFS1P28331 727 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 PTGR1Q14914 329 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 NFE2Q16621 373 aaPredicted RBP4.4□□□□□ -1.71
PTPN4-205ENST00000433888 SMTNL2Q2TAL5 461 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 ARHGAP29Q52LW3 1261 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 PIK3CD-AS1Q5SR53 167 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 DARS2Q6PI48 645 aaKnown RBP4.4□□□□□ -1.71
PTPN4-205ENST00000433888 KYAT3Q6YP21 454 aaKnown RBP4.4□□□□□ -1.71
PTPN4-205ENST00000433888 SRGAP1Q7Z6B7 1085 aa4.4□□□□□ -1.71
PTPN4-205ENST00000433888 ADGRF4Q8IZF3 695 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms