RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DNAJC24Q6P3W2 148 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 BEND5Q7L4P6 421 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
TREX1-201ENST00000433541 CNGA4Q8IV77 575 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 ADGRG2Q8IZP9 1017 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 OR8K1Q8NGG5 319 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 SLC2A13Q96QE2 648 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 BBS2Q9BXC9 721 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 LTB4R2Q9NPC1 389 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 C11orf16Q9NQ32 467 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 SPHK2Q9NRA0 654 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 SLC12A6Q9UHW9 1150 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 AGO1Q9UL18 857 aaKnown RBP16.16■□□□□ 0.18
TREX1-201ENST00000433541 TLR6Q9Y2C9 796 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 OTOL1A6NHN0 477 aaPredicted RBP16.15■□□□□ 0.18
TREX1-201ENST00000433541 IRAK2O43187 625 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 MFAP3LO75121 409 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 PLEKP08567 350 aaPredicted RBP16.15■□□□□ 0.18
TREX1-201ENST00000433541 KRT3P12035 628 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 ABCB4P21439 1286 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 SCNN1AP37088 669 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
TREX1-201ENST00000433541 GRSF1Q12849 480 aaKnown RBP eCLIP16.15■□□□□ 0.18
TREX1-201ENST00000433541 BMP8AQ7Z5Y6 402 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 EMC1Q8N766 993 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 NAT16Q8N8M0 369 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 PJA1Q8NG27 643 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 NELL2Q99435 816 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 LRFN3Q9BTN0 628 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 RRN3Q9NYV6 651 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 TAS2R14Q9NYV8 317 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 ZDBF2Q9HCK1 2354 aa16.15■□□□□ 0.18
TREX1-201ENST00000433541 TYW5A2RUC4 315 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 DDX3XO00571 662 aaKnown RBP eCLIP16.14■□□□□ 0.17
TREX1-201ENST00000433541 TRDMT1O14717 391 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 TSPAN3O60637 253 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 KLKB1P03952 638 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 DCNP07585 359 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 SLC2A3P11169 496 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 SDC4P31431 198 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 CLCN5P51795 746 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 MLLT6P55198 1093 aaPredicted RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 PITX1P78337 314 aaPredicted RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 DEUP1Q05D60 604 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 KDSRQ06136 332 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 RING1Q06587 406 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 NNTQ13423 1086 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 LRRC32Q14392 662 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 CDO1Q16878 200 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 ZC3H12AQ5D1E8 599 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 CWF19L1Q69YN2 538 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 DCUN1D2Q6PH85 259 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 RHBDF2Q6PJF5 856 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 TXNDC11Q6PKC3 985 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 Q6ZNB5 142 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 MON1BQ7L1V2 547 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 TMEM25Q86YD3 366 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 MCOLN2Q8IZK6 566 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 ATP6V0D2Q8N8Y2 350 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 C3orf20Q8ND61 904 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 DDI1Q8WTU0 396 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 CD101Q93033 1021 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 ZNF653Q96CK0 615 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 MRFAP1L1Q96HT8 127 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 CFAP57Q96MR6 1250 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 XPO6Q96QU8 1125 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 DDX50Q9BQ39 737 aaKnown RBP16.14■□□□□ 0.17
TREX1-201ENST00000433541 ABHD10Q9NUJ1 306 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 PLK2Q9NYY3 685 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 PAXBP1Q9Y5B6 917 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 KIAA1549LQ6ZVL6 1849 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 KMT2EQ8IZD2 1858 aa16.14■□□□□ 0.17
TREX1-201ENST00000433541 ATMINO43313 823 aaPredicted RBP16.13■□□□□ 0.17
TREX1-201ENST00000433541 AKR1B10O60218 316 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 RTN2O75298 545 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 GJB6O95452 261 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 FTLP02792 175 aaPredicted RBP16.13■□□□□ 0.17
TREX1-201ENST00000433541 TYRP14679 529 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 AOC1P19801 751 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 TARSP26639 723 aaKnown RBP16.13■□□□□ 0.17
TREX1-201ENST00000433541 CCR1P32246 355 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 FLT3P36888 993 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 EIF4A3P38919 411 aaKnown RBP16.13■□□□□ 0.17
TREX1-201ENST00000433541 ATP11AP98196 1134 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 CHFRQ96EP1 664 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 TRIM11Q96F44 468 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 FCRL2Q96LA5 508 aaPredicted RBP16.13■□□□□ 0.17
TREX1-201ENST00000433541 MCEEQ96PE7 176 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 TBCBQ99426 244 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 DNAJC7Q99615 494 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 SYT11Q9BT88 431 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.13■□□□□ 0.17
TREX1-201ENST00000433541 MYO1AQ9UBC5 1043 aa16.13■□□□□ 0.17
TREX1-201ENST00000433541 MTF2Q9Y483 593 aaPredicted RBP16.13■□□□□ 0.17
TREX1-201ENST00000433541 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
TREX1-201ENST00000433541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.12■□□□□ 0.17
TREX1-201ENST00000433541 ACSL4O60488 711 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms