RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 TNRC6BQ9UPQ9 1833 aaKnown RBP16.96■□□□□ 0.3
ACTB-205ENST00000432588 SLC12A8A0AV02 714 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 WASH3PC4AMC7 463 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 XPO1O14980 1071 aaKnown RBP16.95■□□□□ 0.3
ACTB-205ENST00000432588 SYNCRIPO60506 623 aaKnown RBP16.95■□□□□ 0.3
ACTB-205ENST00000432588 SYPP08247 313 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 LRRC63Q05C16 580 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 CUL2Q13617 745 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 EIF4HQ15056 248 aaKnown RBP16.95■□□□□ 0.3
ACTB-205ENST00000432588 CBWD6Q4V339 395 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 CBWD3Q5JTY5 395 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 CBWD5Q5RIA9 395 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 PM20D1Q6GTS8 502 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 ANKS1BQ7Z6G8 1248 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 RGL4Q8IZJ4 473 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 FMR1NBQ8N0W7 255 aaPredicted RBP16.95■□□□□ 0.3
ACTB-205ENST00000432588 DDI1Q8WTU0 396 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 RNF139Q8WU17 664 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 IPO9Q96P70 1041 aaKnown RBP16.95■□□□□ 0.3
ACTB-205ENST00000432588 SLC2A11Q9BYW1 496 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 ULBP1Q9BZM6 244 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 SUSD2Q9UGT4 822 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 ARMCX3Q9UH62 379 aaPredicted RBP16.95■□□□□ 0.3
ACTB-205ENST00000432588 TSPAN16Q9UKR8 245 aa16.95■□□□□ 0.3
ACTB-205ENST00000432588 ZFHX4Q86UP3 3567 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 UPK3BL1B0FP48 263 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 UPK3BL2E5RIL1 263 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 OPHN1O60890 802 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 CD19P15391 556 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 GNSP15586 552 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 TBXAS1P24557 533 aaPredicted RBP16.94■□□□□ 0.3
ACTB-205ENST00000432588 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
ACTB-205ENST00000432588 ARID5AQ03989 594 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 PDE4CQ08493 712 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 BST2Q10589 180 aaKnown RBP16.94■□□□□ 0.3
ACTB-205ENST00000432588 GEN1Q17RS7 908 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 FUT11Q495W5 492 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 WDR45BQ5MNZ6 344 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 METTL3Q86U44 580 aaKnown RBP16.94■□□□□ 0.3
ACTB-205ENST00000432588 SLC41A1Q8IVJ1 513 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 SIX6OS1Q8N1H7 587 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 ZNF419Q96HQ0 510 aaPredicted RBP16.94■□□□□ 0.3
ACTB-205ENST00000432588 SLC6A17Q9H1V8 727 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 PRDM16Q9HAZ2 1276 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 THAP10Q9P2Z0 257 aaPredicted RBP16.94■□□□□ 0.3
ACTB-205ENST00000432588 KIAA1257Q9ULG3 409 aa16.94■□□□□ 0.3
ACTB-205ENST00000432588 ARHGAP33O14559 1287 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 TIMM44O43615 452 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 PROS1P07225 676 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 CD6P30203 668 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 ZNF445P59923 1031 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 SEMA3BQ13214 749 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 STIM1Q13586 685 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 ANKRD40Q6AI12 368 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 FMNL3Q8IVF7 1028 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 ZC3H3Q8IXZ2 948 aaKnown RBP16.93■□□□□ 0.3
ACTB-205ENST00000432588 SMARCE1Q969G3 411 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 P2RY11Q96G91 374 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 CIPCQ9C0C6 399 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 FSCN3Q9NQT6 498 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 ELOVL2Q9NXB9 296 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 HBS1LQ9Y450 684 aaKnown RBP16.93■□□□□ 0.3
ACTB-205ENST00000432588 PI4KAP42356 2102 aa16.93■□□□□ 0.3
ACTB-205ENST00000432588 CFAP47Q6ZTR5 3102 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 CHD6Q8TD26 2715 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 ASCC3Q8N3C0 2202 aaKnown RBP16.92■□□□□ 0.3
ACTB-205ENST00000432588 SETSIPP0DME0 302 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 VDRP11473 427 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 IL12RB1P42701 662 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 ADIGQ0VDE8 80 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 ENPP2Q13822 863 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 TRIP4Q15650 581 aaPredicted RBP16.92■□□□□ 0.3
ACTB-205ENST00000432588 PLEKHG6Q3KR16 790 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 MPPE1Q53F39 396 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 BSPRYQ5W0U4 402 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 UNQ6494/PRO21346Q6UXR6 183 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 PIP4P1Q86T03 277 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 FAM217AQ8IXS0 508 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 MINDY1Q8N5J2 469 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 PRCCQ92733 491 aaPredicted RBP16.92■□□□□ 0.3
ACTB-205ENST00000432588 PIWIL1Q96J94 861 aaKnown RBP16.92■□□□□ 0.3
ACTB-205ENST00000432588 ADAM33Q9BZ11 813 aa16.92■□□□□ 0.3
ACTB-205ENST00000432588 METTL14Q9HCE5 456 aaKnown RBP16.92■□□□□ 0.3
ACTB-205ENST00000432588 ASPMQ8IZT6 3477 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 MEI4A8MW99 385 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 TULP2O00295 520 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 PSMA7O14818 248 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 ACADMP11310 421 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 OXTRP30559 389 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 RDXP35241 583 aaKnown RBP16.91■□□□□ 0.3
ACTB-205ENST00000432588 SIM1P81133 766 aaPredicted RBP16.91■□□□□ 0.3
ACTB-205ENST00000432588 ZNF234Q14588 700 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 SERPINA13PQ6UXR4 307 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 BHLHA9Q7RTU4 235 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 TMPRSS6Q8IU80 811 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 CADM4Q8NFZ8 388 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
ACTB-205ENST00000432588 UBA3Q8TBC4 463 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms