RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 F5H0A9 414 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 CSF1P09603 554 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ELFN1P0C7U0 828 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ITGAMP11215 1152 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ALADP13716 330 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ZFXP17010 805 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 RXRAP19793 462 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 THBS4P35443 961 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 GSTM5P46439 218 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 DIO1P49895 249 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 E2F1Q01094 437 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 SLC12A1Q13621 1099 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 DLGAP5Q15398 846 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 PRICKLE4Q2TBC4 344 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ZNF484Q5JVG2 852 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ANKRD16Q6P6B7 361 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 Q6ZNX1 250 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ZNF551Q7Z340 670 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 TBC1D1Q86TI0 1168 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 GALNT4Q8N4A0 578 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 EXD3Q8N9H8 876 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 OR52L2PQ8NGH6 319 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 RFFLQ8WZ73 363 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 REXO5Q96IC2 774 aaKnown RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAR2Q96K12 515 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 SNX18Q96RF0 628 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 AIFM2Q9BRQ8 373 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 PHF7Q9BWX1 381 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 WDR11Q9BZH6 1224 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 OSBPL5Q9H0X9 879 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 CDCP1Q9H5V8 836 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 CCDC134Q9H6E4 229 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 CHODLQ9H9P2 273 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 PLEKHA2Q9HB19 425 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 DUSP22Q9NRW4 184 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 FBXO28Q9NVF7 368 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 ANKFY1Q9P2R3 1169 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 AFG3L2Q9Y4W6 797 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 KAT6BQ8WYB5 2073 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 GRID2IPA4D2P6 1211 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 H0YIZ8 118 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 STX16-NPEPL1H3BU86 382 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 PSMD9O00233 223 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 STX16O14662 325 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 CA12O43570 354 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 TMPRSS11DO60235 418 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 FOXD2O60548 495 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 TSPAN3O60637 253 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 PRAMEF2O60811 474 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 MBD4O95243 580 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 DLDP09622 509 aaKnown RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 MYCLP12524 364 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ATP1A3P13637 1013 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 CHN1P15882 459 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 CREB1P16220 341 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ATF7P17544 494 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 MATN1P21941 496 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ELF1P32519 619 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 MAN1A1P33908 653 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ADRA1BP35368 520 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 MPLP40238 635 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 CASP2P42575 452 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 TPTEP56180 551 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 SUMO2P61956 95 aaKnown RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 GPC5P78333 572 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 DGCR2P98153 550 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 MAPK7Q13164 816 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 FOXE3Q13461 319 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 TUBA3CQ13748 450 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ANKRD1Q15327 319 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 RPS6KA2Q15349 733 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 BAK1Q16611 211 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 FBLN7Q53RD9 439 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 RNASE12Q5GAN4 147 aaKnown RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 WDR45BQ5MNZ6 344 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 SLC9C2Q5TAH2 1124 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ATG16L1Q676U5 607 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 TUBA3EQ6PEY2 450 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 Q6YL49 198 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 Q6ZPA2 131 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 PARS2Q7L3T8 475 aaKnown RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 SFTPA1Q8IWL2 248 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 NME8Q8N427 588 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 LSM14AQ8ND56 463 aaKnown RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 TOR1AIP2Q8NFQ8 470 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 GOLGA1Q92805 767 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 PDLIM2Q96JY6 352 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 SLC26A6Q9BXS9 759 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 RNF26Q9BY78 433 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 GPR63Q9BZJ6 419 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 BRD8Q9H0E9 1235 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 ARHGEF3Q9NR81 526 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 FOXJ2Q9P0K8 574 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 FBXO9Q9UK97 447 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 FZD4Q9ULV1 537 aa3.55□□□□□ -1.84
HMGB1P27-201ENST00000431429 SPATA31A1Q5TZJ5 1347 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 HMGB1P1B2RPK0 211 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 H3BNC9 293 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 ZNF213O14771 459 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 HNRNPRO43390 633 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms