RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DPY30Q9C005 99 aa16.87■□□□□ 0.29
RIF1-204ENST00000430328 DNAJC16Q9Y2G8 782 aa16.87■□□□□ 0.29
RIF1-204ENST00000430328 MAGI1Q96QZ7 1491 aaPredicted RBP16.87■□□□□ 0.29
RIF1-204ENST00000430328 TPBGLP0DKB5 382 aa16.87■□□□□ 0.29
RIF1-204ENST00000430328 ITFG1Q8TB96 612 aa16.87■□□□□ 0.29
RIF1-204ENST00000430328 TRIM2Q9C040 744 aa16.87■□□□□ 0.29
RIF1-204ENST00000430328 PTGFRNQ9P2B2 879 aa16.87■□□□□ 0.29
RIF1-204ENST00000430328 ACSL4O60488 711 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 CST8O60676 142 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 HPCAL1P37235 193 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 MTM1Q13496 603 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 TMEM132DQ14C87 1099 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 PLGRKTQ9HBL7 147 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 CROTQ9UKG9 612 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 TELO2Q9Y4R8 837 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 PDHBP11177 359 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 TYSND1Q2T9J0 566 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SCAIQ8N9R8 606 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 CASP1P29466 404 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 CACNB3P54284 484 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 MYDGFQ969H8 173 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.86■□□□□ 0.29
RIF1-204ENST00000430328 CD109Q6YHK3 1445 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SERPINA1P01009 418 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 ITIH1P19827 911 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SKIV2L2P42285 1042 aaKnown RBP16.86■□□□□ 0.29
RIF1-204ENST00000430328 TMEM179Q6ZVK1 233 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 TRPV1Q8NER1 839 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SIPA1Q96FS4 1042 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SCUBE2Q9NQ36 999 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 MPOP05164 745 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 TOMM20Q15388 145 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 RNF44Q7L0R7 432 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SLC38A2Q96QD8 506 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SERPINA3P01011 423 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 RLN1P04808 185 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 GLRBP48167 497 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 BROXQ5VW32 411 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 STOX1Q6ZVD7 989 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 GRIP1Q9Y3R0 1128 aa16.86■□□□□ 0.29
RIF1-204ENST00000430328 SSU72P8A0A1W2PR75 194 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 SDR42E2A6NKP2 422 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 RGS14O43566 566 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 STAU1O95793 577 aaKnown RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 HALP42357 657 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 ALDH1A3P47895 512 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 MSLNQ13421 630 aaPredicted RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 SPATA33Q96N06 139 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 TMEM237Q96Q45 408 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 FICDQ9BVA6 458 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 NLNQ9BYT8 704 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 SSR3Q9UNL2 185 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 A0A1W2PQ72 361 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 IFNA6P05013 189 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 CDK8P49336 464 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 NCOA4Q13772 614 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 PSMD5Q16401 504 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 ANKRD26P1Q6NSI1 321 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 BBS4Q96RK4 519 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 TCF7L2Q9NQB0 619 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 RPS6KA6Q9UK32 745 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 TMCO1Q9UM00 188 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 MYH9P35579 1960 aaKnown RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 TEX33O43247 280 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 AP1G2O75843 785 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 ARPC4P59998 168 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 MTAPQ13126 283 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 CRISPLD1Q9H336 500 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 GAS2O43903 313 aaKnown RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 SLC2A4P14672 509 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 PECAM1P16284 738 aaPredicted RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 CELF4Q9BZC1 486 aaKnown RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 PABPC3Q9H361 631 aaKnown RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 ACTR8Q9H981 624 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 FEM1BQ9UK73 627 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 MAGEB3O15480 346 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 APOL3O95236 402 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 MYBPC3Q14896 1274 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 ACAP1Q15027 740 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 FRMD8P1Q9BZ68 369 aaPredicted RBP16.85■□□□□ 0.29
RIF1-204ENST00000430328 MARCH7Q9H992 704 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 NEUROD4Q9HD90 331 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 TRIM10Q9UDY6 481 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 GRAP2O75791 330 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 RAG1P15918 1043 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 SKP1P63208 163 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 CDC42EP1Q00587 391 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 NAB2Q15742 525 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 FNDC5Q8NAU1 212 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 BTBD10Q9BSF8 475 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 TIPINQ9BVW5 301 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 CST11Q9H112 138 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
RIF1-204ENST00000430328 LRRC4BQ9NT99 713 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms